Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7005 |
Symbol | |
ID | 8363197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8772391 |
End bp | 8773437 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644969138 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_003126607 |
Protein GI | 256425954 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000158499 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGGATA TACTGGCAGC TTATGGATTA TCAATGGCCG AATGCCTTAT TCAGCCATTC GGCAGTGGCC TTATCAACGC CACCTGGAAG ATCTCTGCAG GCGATCGTCA CTACATCCTG CAACGCATCA ATCATGGGGT GTTTAAGCAG CCAACACTGA TAGCTGAAAA CATCAGCACT ATCGGCCGCC ACCTGGATAC GTATCATCCG GCATATTTCT TTGTACAGCC GGTGCGTACC ATCGACGGAC AGGATATGTA CATCACAACT GAAGGCGCTT ATTTCCGTAT GCAACCTTTT GTTGCTGATT CCCGCAGTTA TGATGTGGTA GATAATGCAC AACTGGCATT TGAAGCAGCC AGACAATTCG GTCGCTTTAC AAAACTGCTG TCAGATATTG ATATCAATAC GATTCAATAT CCACTGCCTG ATTTTCACAA TCTCACGCTG CGTTATCAAC AGTTTGAACA GGCCATAAAA CAAGGTAATC AGGCAAGAAT AGCAGAAGCT GCAACAGATA TTGACATGAT CCGCAGCTAT CAGCACCTGA CAGCAACATT TAAAGCCATA CAGCAACATC CTGGTTTCAA AATGCGGGTG ATGCATCACG ATACCAAGAT CAGCAACGTA TTATTTGATA ACGCTGATAA TGGAATCTGT GTGATCGATC TGGATACAGT GATGCCGGGG TATTTCATCA GTGATTTCGG AGATATGATG CGTACTTATC TTTCTCCTGT CAGCGAAGAA GAAACGGACT TCAGTAAAGT ACAGGTAAGA ACAGATTATT ACCAGGCTAT TGTACAGGGA TATCTGAGTG AAATGAAAGA TGAACTCAGC GGGGCAGAAA AAGCACACCT TGTGTATGCA GGACAGTTCC TGGTATATAT GCAGGCCATC CGTTTCCTGA CGGATTATTT CAACAATGAT AGTTACTACG GCGCAAAATA TGAACGACAC AATCTCCTGC GGGCGCGTAA CCAGCTCACA CTGCTGAACA ACATTACGCA GCAGGCACAA ACGCTTTCTT TAGTGGCAGC AGACTAG
|
Protein sequence | MQDILAAYGL SMAECLIQPF GSGLINATWK ISAGDRHYIL QRINHGVFKQ PTLIAENIST IGRHLDTYHP AYFFVQPVRT IDGQDMYITT EGAYFRMQPF VADSRSYDVV DNAQLAFEAA RQFGRFTKLL SDIDINTIQY PLPDFHNLTL RYQQFEQAIK QGNQARIAEA ATDIDMIRSY QHLTATFKAI QQHPGFKMRV MHHDTKISNV LFDNADNGIC VIDLDTVMPG YFISDFGDMM RTYLSPVSEE ETDFSKVQVR TDYYQAIVQG YLSEMKDELS GAEKAHLVYA GQFLVYMQAI RFLTDYFNND SYYGAKYERH NLLRARNQLT LLNNITQQAQ TLSLVAAD
|
| |