| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7004 |
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| Symbol | |
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| ID | 8363196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8771297 |
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| End bp | 8772310 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644969137 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003126606 |
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| Protein GI | 256425953 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000759079 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATC CACCAACTAT AAAAGAAATC GCCAAAAGGC TCAACCTGGC CGCCTCCACT
GTATCCAGGG CTTTGCACAA TCATCCGCGT ATTGGCTTGA AAACCAGGAT GCAGGTACAG
GCGCTCGCCC GCGAATTGCA ATATGAGCCG AATCAGACCG CCATTTTCTT CCAGCAGAAA
AAAACATTTA CCCTGGGTAT TGTACTCCCT GAACTGTCAG AAGCCTTCTT TTCCGCAGCG
ATCAGCGGCA TAGAAGATAC TGCCAACAAG AGCAATTACA TGGTGCTGCT GGGCCAGTCG
CATGATGACG CAACAAGAGA ACAGAAGATC GTGGAAATCA TGAAAAATCA CCGGGTAGAC
GGACTGCTGG TTTCCCTGGC CAAAAACACC GTACACTACG CACATTTCGA AATGCTGCGG
AAATACAATA TCCCTGTCGT ATTCTTTGAC CGGATCCCCG ATATGAAAGA TATCCACTAT
GTCGCTTCGA ATATGGAATC AGGCACCATC CAGGCCGTAT CTTTCTTATT ACAGCAGGGA
CATCGGGTCA TCGGTATGAT CAATGGACCT GAAAAGCTGA TCGCCAGCCG GCAACGTACA
ACAGGTTACC GGAAAGCCAT GCAGCAGCAA CGCCTGAAAT ATGACGCGAC CCTCAATGTA
CACAGCGATC TTACCAAAGA AGGTACGCGT CAGGCCATGC AACAACTACT CTCCAACAAA
AGGAAAATAA CCGCCGTTGT CGCTTTTAAT GACTATGTCT CACAAGATGC AGTGCAATAT
GCCGCTGAAC AAGGCATACA GATCAATAAA GACATCTGCT TCGTCAGTTA TGCCAATCTG
CCGCTGAGTA GTTATATGGC ATATCCTCCT CTCGCCTCCG TTGAACAATA CCCCTATCTG
CAAGGACAGA AAGCCACCGA AATACTCCTG GACCTCCTGT CAGGTAAACT GGCCCCGGAT
GCTTATCAGC AGATCGTTGT CGACTCCAGA CTGGTCATTG CACCTGGGAA GTAA
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| Protein sequence | MPNPPTIKEI AKRLNLAAST VSRALHNHPR IGLKTRMQVQ ALARELQYEP NQTAIFFQQK
KTFTLGIVLP ELSEAFFSAA ISGIEDTANK SNYMVLLGQS HDDATREQKI VEIMKNHRVD
GLLVSLAKNT VHYAHFEMLR KYNIPVVFFD RIPDMKDIHY VASNMESGTI QAVSFLLQQG
HRVIGMINGP EKLIASRQRT TGYRKAMQQQ RLKYDATLNV HSDLTKEGTR QAMQQLLSNK
RKITAVVAFN DYVSQDAVQY AAEQGIQINK DICFVSYANL PLSSYMAYPP LASVEQYPYL
QGQKATEILL DLLSGKLAPD AYQQIVVDSR LVIAPGK
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