Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7000 |
Symbol | |
ID | 8363192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8766853 |
End bp | 8767959 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644969133 |
Product | alanine racemase domain protein |
Protein accession | YP_003126602 |
Protein GI | 256425949 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.786712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTACG AACTACACAA TATCAACACT ATTGATACGC CTGCTGTGCT TGTGTATCCT GAGCGTATGC TGGATAATAT CCGCTTACTG AAACAGACGG TAGGAGATGT GCAGCGTTTG CGTCCGCACA TCAAGACCAG TAAGATGATT GAAGCCGTGC AGTTGTTGCA GGGTGAAGGC ATTAACAAGT TCAAATGTGC CACTATCGCT GAAGCAGAAA TGCTGGGTCT GGCAGGGGCT GGTGATGTAT TACTGGCGTA TCAGCCTGTA GGGCCGAAGG TTGACCGCTT ATTGCAGATC GTGGAGCAAT ATCCGGACAC GAAATATGCC TGTCTTGTGG ATAACAGCGC GTCTGCGATC GCTATTGCGG CCACATTCGC AGCAGCGCAG CGTTCTATCC CTGTTTATAT TGATCTCAAT GTCGGGATGA ACAGGACCGG TGTCGAGCCG GGACCCGGTA ATGAAGCGCA GGAACTGTAC CAGGAACTGC TGCATTTACC AGGTATTACG CCGGTGGGCT TACATGCATA CGACGGACAT CTGCATGATA CAGAATTTGA GTTACGCAGA GAGAAGTGTA ATGCAGGGTT TGCGCCTGTC CTCGCATTGG CTGCCGCTAT TACAGAAGCC GGCGCTCCTG CCCCGCAGAT TATCGCGGGA GGTACGCCTA CTTATGCGAT ACACGCAGAA CGTCCTGGTG TGGAATGTAG TCCGGGAACC TTTATATTCC AGGATTGGGG ATATCACAAG CTGCATCCGG AGCAGACATT TGATTTTGCC GCTGCTGTTA TTACCAGGGT GATCTCGGTG GTCGATGGTA CGCATATCTG TGTTGATCTG GGACATAAGT CAGTGGCTTC TGAGAATCCG CAGCCCCGTA TTTATTTCCT GAATGCACCC GATGCGGAAC CCCTGGGGCA CAGTGAGGAA CATATGGTGC TGAAGGTGCC TGATGCGGCA TTATTTCCGG TGGGAACGGT GCTGTATGGC ATACCGATGC ATATCTGTCC GACAGTTGCC CTGCATGAAC GCGTAGGCGT TGTGGAAAAT AATAACTGTG TAGCCTGGTG GAAAGTGATC GCCAGAGACA GAAAGATCAT GATCTAA
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Protein sequence | MWYELHNINT IDTPAVLVYP ERMLDNIRLL KQTVGDVQRL RPHIKTSKMI EAVQLLQGEG INKFKCATIA EAEMLGLAGA GDVLLAYQPV GPKVDRLLQI VEQYPDTKYA CLVDNSASAI AIAATFAAAQ RSIPVYIDLN VGMNRTGVEP GPGNEAQELY QELLHLPGIT PVGLHAYDGH LHDTEFELRR EKCNAGFAPV LALAAAITEA GAPAPQIIAG GTPTYAIHAE RPGVECSPGT FIFQDWGYHK LHPEQTFDFA AAVITRVISV VDGTHICVDL GHKSVASENP QPRIYFLNAP DAEPLGHSEE HMVLKVPDAA LFPVGTVLYG IPMHICPTVA LHERVGVVEN NNCVAWWKVI ARDRKIMI
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