Gene Cpin_6997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6997 
Symbol 
ID8363189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8764373 
End bp8765275 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content51% 
IMG OID644969130 
Productdienelactone hydrolase 
Protein accessionYP_003126599 
Protein GI256425946 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.253602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCT CATCTGTTAC CGTACGCCGT ATATGCTGCC CTGCATTGCT TTTATGTGTA 
TTTGCCCTGA TCGCTGCCGC CTGTACCAAG CTGGGTTCTA CCGCCCGGGA TATCGCTGCT
GAAGACAGGG TTCCCTCTTT GCCTGCTATG GAATTATTGA ATGAACATTA CGGGAAAGAT
TCCCTGCAGG TAATGGACAT TTATTTGCCA GCCGGCAGGG ATCCTTCTAT TACACATATC
ATGGTGTTTG TTCATGGAGG GGGATGGATG GGGAGTGACA TGCGGGATTA TACCCCGCAT
ATTGACAATA TGAAGAACCG GGACTCAAAG TATACCTATG TGAATCTGAA TTACCGGCTG
GTCAGAGATG GTAAAAACAC GTTCCCTGCT GCGGAGGAAG ATGTGAATGC CGCGTTGCAA
TATGTCTGGC GTCTGGCTGA CAGCTTTCAT ATTTCCCGGG CCACCGGCAT CATTGGTACC
AGTGCGGGCG CGCATCTGGC CGCATTACAG GCGAGTAAAC ATAATGAGAA GGGGTACATT
AAAGCGGCGG TTTGTCTGTT AGGCGTGTAT GACATGCAAC GTTTTTACCA GGAAGGCAGT
GCCGGCGTAC CCGAACTGGC GGCGGCCGTA CTGGGTGGTA CGCCGGGGCA GCGAACGGAT
TTATACCGTA GTTCCAGTCC GCTGTTTTAT GTGCATGAAA AGACGCCGCC TACCTTGCTG
ATACATGGCA CAGAAGACAC GCTCGCCCGT TATTCACAGG CGGTGGCGAT GGACAGTGTC
CTGGAGAAAG CGGGCGTCGT ACATGAATTA TACAGCTTTA AGGGCTGGCA TGCCATACCC
GCTGATAAGA TCGTCGACGC TGCCGAAAAG ATGTTTGATT TTATTGCGAA GTATACGAAG
TAA
 
Protein sequence
MPISSVTVRR ICCPALLLCV FALIAAACTK LGSTARDIAA EDRVPSLPAM ELLNEHYGKD 
SLQVMDIYLP AGRDPSITHI MVFVHGGGWM GSDMRDYTPH IDNMKNRDSK YTYVNLNYRL
VRDGKNTFPA AEEDVNAALQ YVWRLADSFH ISRATGIIGT SAGAHLAALQ ASKHNEKGYI
KAAVCLLGVY DMQRFYQEGS AGVPELAAAV LGGTPGQRTD LYRSSSPLFY VHEKTPPTLL
IHGTEDTLAR YSQAVAMDSV LEKAGVVHEL YSFKGWHAIP ADKIVDAAEK MFDFIAKYTK