| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6989 |
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| Symbol | |
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| ID | 8363181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8754209 |
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| End bp | 8755915 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969122 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_003126591 |
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| Protein GI | 256425938 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000550153 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGAAAC GCTGGACAGT ACGATCTTAT CAACCTAAAC AGGAAGCATT GCTCCAGTCG
TCTTTACGTA TACACCCATT GCTGTGCCGA CTCCTCGTAC AAAGAGGTAT GCACACCTAC
GACGAATCCA GGCTCTTTTT CAGACCCACA CTCGCAGATC TGCACGATCC GTGGTTGATG
AAAGACATGG ATAAAGCAGT ATCCCGTATC GAACAGGCTT TCTTCCACCG GGAGAAAATA
CTGGTGTTCG GAGACTATGA CGTGGATGGA ACAACCGCTG TAGCAACCGT ATACGACTTT
CTGCACTCCT TATATAATAA TATAGAATTT TACATTCCTC ACCGGTATAA AGAAGGTTAC
GGTATCTCCA CACAAGGCAT AGAATACGCC AGAGATAACG AATTCACGCT CATCATCACA
CTGGATTGCG GCATCAAAGC CATCGACCAG ATAAAATGGG CAGCCGACAA CGGAATCGAC
TTCATTATAT GTGATCATCA CCTGCCAGAT GCAATCCTGC CACCTGCCGT AGCCATCCTG
AATCCAAAAC AATACGACTG CCCTTATCCT TATAAAGAAC TAAGCGGCTG TGGTATCGGA
TATAAACTGA TTTCAGCCTT CGCGCAGAAA AAAGGAATCC CGGATGAACA GGTACACCGC
TATCTCGATC TCGTGGCCAC CAGTATCGCA GCTGATATTG TCCCCATGAC AGGCGAAAAC
AGGGTACTGG CCTTTCACGG ATTAAAAAAG GTGAACTCCG CTCCCCTCGC AGGTATACAG
GCACTGATAG AACTCAGCGG ACTGAAAGAA CAACTCACCA TCTCCAATCT TGTATTTGTC
ATCGCGCCAA GGGTTAACGC TGCCGGCCGT ATGGACGACG CCAGAAAAGC AGTGAACCTC
TTTGTCGAAA CAGACAAAGA CAAAGCAATG GAGATCGCCA AAGTATTACA CGCAGATAAT
TTCGACAGAA AAGAAATTGA TGGCAACATC ACCAAAGAAG CGGTCGAACT GCTGCAGAAC
GATCTGACCT TAAAAGATAA AAAGTCTACC GTACTCTATA AACCCGACTG GCACAAAGGT
GTCGTTGGAA TCGTTGCGTC AAGACTGATC GATAAATATT ATTACCGCCC TACCATCATT
CTCACACTCA GCAATGATAA AGTGGCCGGC TCCGCACGTT CCGTAACCGG TTTCAATGTA
TACGAAGCCA TACACCAGTG TAAAGACCTG CTGGAAAACT ACGGCGGACA TTTTTACGCT
GCTGGTATGA CGCTGAAACC TGAAAATGTG GAAGCTTTTC AGCAAAAGTT TGAAGAAGTA
GTGGCGACGA CCATCAATCC GGATCTCCTC GTACCCGAGA TTGTAATCGA TACCGAAATC
CACCTGAAAG ATATTACACC TGCCTTTTTT AATATATTAC GTCAGTTCGA ACCACTGGGA
CCAGAAAATC TACGCCCCGT TTTCCTCGTA AGAAACGTGG TTGACAGCGG ATATTCACGT
CTTGTCAAAG ATGAACATAT TAAGTTCTCC GTTAAACAGG GTAAATCTCC TAACGCATTA
ACGGGCATAG GATTCTACAT GTCTGAAAAA TTCCACATCG TGAGCAGTAA ACAGCCCTTC
GATATGGCCT TCACGATCGA TGAAAATGAG TGGAATGGCA AGATGAACCT GCAATTGAAG
GTCATCGATA TCAGAGCACA TCACTAA
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| Protein sequence | MQKRWTVRSY QPKQEALLQS SLRIHPLLCR LLVQRGMHTY DESRLFFRPT LADLHDPWLM
KDMDKAVSRI EQAFFHREKI LVFGDYDVDG TTAVATVYDF LHSLYNNIEF YIPHRYKEGY
GISTQGIEYA RDNEFTLIIT LDCGIKAIDQ IKWAADNGID FIICDHHLPD AILPPAVAIL
NPKQYDCPYP YKELSGCGIG YKLISAFAQK KGIPDEQVHR YLDLVATSIA ADIVPMTGEN
RVLAFHGLKK VNSAPLAGIQ ALIELSGLKE QLTISNLVFV IAPRVNAAGR MDDARKAVNL
FVETDKDKAM EIAKVLHADN FDRKEIDGNI TKEAVELLQN DLTLKDKKST VLYKPDWHKG
VVGIVASRLI DKYYYRPTII LTLSNDKVAG SARSVTGFNV YEAIHQCKDL LENYGGHFYA
AGMTLKPENV EAFQQKFEEV VATTINPDLL VPEIVIDTEI HLKDITPAFF NILRQFEPLG
PENLRPVFLV RNVVDSGYSR LVKDEHIKFS VKQGKSPNAL TGIGFYMSEK FHIVSSKQPF
DMAFTIDENE WNGKMNLQLK VIDIRAHH
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