Gene Cpin_6986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6986 
Symbol 
ID8363178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8749228 
End bp8751213 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content46% 
IMG OID644969119 
ProductK potassium transporter 
Protein accessionYP_003126588 
Protein GI256425935 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.571387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000436362 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTGGCTT TTTTATTAAA TACATATTTC GTGAGAAAAG ACATTAACAG GATTAGCCTG 
GCCGGTTTAG TAGTAGCTTT AGGTATTATT TACGGTGACA TTGGAACCTC TCCGTTATAC
GTTTTCAAGG CCATTGTAGG CAATAATCCC GTAAGCGATC TCCTGGTTAT CGGTGGTATA
TCCTGTATCA TCTGGACCCT GACTTTACAA ACAACCATCA AGTACGTAAT CCTGACCCTC
AGGGCCGATA ACAAAGGCGA AGGCGGGATT TTCTCCTTAT ATGCGTTGGT CAGAAGGCAT
GCCAGATGGG CAGTCATATT CGGGATGATC GGAGGAGCCG CATTGCTCGC AGACGGTATC
ATTACCCCAC CTATCACTGT TACATCTGCT ATTGAAGGTT TACGTACCCT GGAGGTATTT
AAAGACCTCA GCCAGTGGGC TATCGTCAAA ATCGTACTGA CTATTATTAC CTTATTGTTC
GTCGTTCAAC AGTTTGGTAC GGTGTCCATC GGTAAATTAT TCGGCCCTAT CATGGTGATC
TGGTTCTCCA TGCTGGGTGT GCTCGGACTG TCACACATCG TAGACGACGT ATCCGTATTT
AAGGCTTTCA GCCCGCATTA CGCTATTAAA CTGCTGACGA CCTATCCCCG TGGATTTATG
ATATTAGGCG CCGTATTCCT GTGTACGACA GGGGCGGAAG CGCTCTATTC CGACCTCGGC
CACTGTGGAA AGGGCAACAT ACGCATCTCC TGGACCTTCG TAAAAGCCTG CCTGATCCTG
AACTATCTCG GACAAGGCGC ATGGCTGCTT ACGCAGAAAG GTCAGATCAT TCCAAAAGAT
ACCAACCCCT TCTTTGCCAT CATGCCGGAA TGGTTTGTCA TCTTTGGTGT ATTGATTGCC
ACCCTGGCCT CCATTATTGC CAGTCAGGCC TTGATATCGG GGTCGTTTAC CCTCATTTCA
GAGGCGATGC GACTCAACCT CTGGCCTAAG TTAAAGATCA ACTATCCGAC AGAAATGCGC
GGACAACTCT ATATCCCTGG TATCAATACC ATGCTGTTTG TAGGGTGTGT GGCTATCGTA
CTGATCTTTA AAGAATCCAG CGCCATGGAA GCGGCTTATG GTCTCTCCAT CACTATCTGT
ATGCTGATGA CCTCCTGTCT CTTCGCTTTC TATCTTTATA CACGAAGGGT TAGATTAAGC
CTTATCCTGA TCTACCTGGT GATCTATTTT ACGCTTGAAT TCTCCTTCCT TTTTGCAAAC
CTGGTGAAAT TCATGCACGG TGGTTATGTG ACCGTTATCG TGGCCGGAGT ACTCTTCCTG
ATCATGATGG TATGGTACAA GTCCCGTAAG ATCAAAAACC GTTACGTAGA GTTTGTCAGA
CTTGAAGATC ACCTGCCGGT GATCCAGGAG CTGAGCAATG ACAGCACCAT CCCTAAATAT
GCCACTCACC TGGTGTATAT GAGCAGTGCC GACAATCCGA AGGAAATTGA ACATAAGATC
ATCTACTCGA TTCTGAATAA AAAGCCGAAG AGAGCAGATA TCTACTGGTT TGTGCATGTG
GATGTAGTGG ACGAACCTTA TCTGAGTGAA TACTCTGTAC AGACCATCAT TCCAAATGAG
GTGATCAGGG TGGAATTCAG ATTGGGTTTC AAAGTGGAGC AGCGTATCAA CCTCATGTTC
CGTATGGTAG TGGAAGACAT GGTGCGTAAC AAGGAGGTGA ACATCACCAG CCGTTACGAA
TCACTAAGTA AAAACAATGT GGTGGGAGAC TTCCAGTTTA TTGTCATGGA GAAATTCCTG
TCACACGACA ACGACCTGCC ATTGTACGAG CGACTGGTCA TGCGTATGTA TTTCTTCCTG
AAGAAGATCA GTTTGTCAGA GGAGCGTGGT TTCGGACTGG ATTCCAGTTA TGTGACCATC
GAAAAGTATC CGCTGGTAGT GGCGCCTGTC ACGAACCTGC AATTGCGACG AATCATACAT
TCTTAA
 
Protein sequence
MVAFLLNTYF VRKDINRISL AGLVVALGII YGDIGTSPLY VFKAIVGNNP VSDLLVIGGI 
SCIIWTLTLQ TTIKYVILTL RADNKGEGGI FSLYALVRRH ARWAVIFGMI GGAALLADGI
ITPPITVTSA IEGLRTLEVF KDLSQWAIVK IVLTIITLLF VVQQFGTVSI GKLFGPIMVI
WFSMLGVLGL SHIVDDVSVF KAFSPHYAIK LLTTYPRGFM ILGAVFLCTT GAEALYSDLG
HCGKGNIRIS WTFVKACLIL NYLGQGAWLL TQKGQIIPKD TNPFFAIMPE WFVIFGVLIA
TLASIIASQA LISGSFTLIS EAMRLNLWPK LKINYPTEMR GQLYIPGINT MLFVGCVAIV
LIFKESSAME AAYGLSITIC MLMTSCLFAF YLYTRRVRLS LILIYLVIYF TLEFSFLFAN
LVKFMHGGYV TVIVAGVLFL IMMVWYKSRK IKNRYVEFVR LEDHLPVIQE LSNDSTIPKY
ATHLVYMSSA DNPKEIEHKI IYSILNKKPK RADIYWFVHV DVVDEPYLSE YSVQTIIPNE
VIRVEFRLGF KVEQRINLMF RMVVEDMVRN KEVNITSRYE SLSKNNVVGD FQFIVMEKFL
SHDNDLPLYE RLVMRMYFFL KKISLSEERG FGLDSSYVTI EKYPLVVAPV TNLQLRRIIH
S