Gene Cpin_6984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6984 
Symbol 
ID8363176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8747109 
End bp8748197 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content41% 
IMG OID644969117 
Productprotein of unknown function DUF450 
Protein accessionYP_003126586 
Protein GI256425933 
COG category[S] Function unknown 
COG ID[COG4748] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00893267 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000001532 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTA AAGATCAGCT CAAACAACTG GGCGACAGAG TCGCCAGACT AAAAGATCAG 
ATACTGACAG AAGAAGCTAC TAAAAATGCC TTCATTATGC CTTTCATCCA ATGCCTTGGA
TACGACGTGT TCAATCCCTT GGAAGTAACG CCCGAATTCA TCGCTGACAT CGGTATCAAA
AAAGGTGAAA AAGTAGACTA TGCCATCATA CAGGACGGTA AACCCACTAT CCTCGTGGAA
TGTAAACACT GGTCCACTGA TCTCAATCCG CACAACAGCC AGTTGTTCCG CTACTTTCAT
TGCACCAGCG CAAGATTCAG CATCCTGACA AATGGCATTC ATTACAAGTT CTACACAGAC
CTGGTAGAAC CTAATAAAAT GGATGAAAAA CCCTTCTTCG AATTCTATAT TGATGACCTG
AAAGAAAATC AGACAGAAAA GCTGAAAGAG TTTCACAAGA GCTACTTTGA CCTGGATAAA
ATATTAACAA CTGCCAGCGA ACTGAAATAC ACCAATGAAA TAAAAAACAT CATTGCCGGT
GATCTCAATG AACCGTCTGA CGAGTTCACA CGCTACTTCG CAAAACTTGT TTATCCCTCC
TCTGTAACAG CAAGAATCCT GGAGCAATTC AAAGGATTAC TGAAGAAATC CTATCAACAG
TTCATCAATG ATACCATCAA TGAAAGACTA AAATCTGCGC TCAATACACA ACAGCAACAG
GAGATAAAAG AAGAACCCGC AGAAACAGAA ATACCCACCG GCGAGGATGC AAAAATCGTC
ACAACAGAAG AAGAACTGGA AGCATTCCAT ATCGTGCGTT CTATGCTGAG ACAGAAGATA
AGTGCAGGCC GTATCGTATT CAGAGATACA CAGTCTTACT TCGGTATCTT ACTGGATGAT
AATAACAGAA GACCTTTATG CAGGGTACAC CTGAACGGCA AGCGGAAATA CCTCTCACTG
TTTGATAAAG ACAATGAAGA AAGGATTGAA ATTGGAAGTG TAGATGATAT CTATGACTAT
GCAGATCAGC TGATGAAAGC AGCGGTGAAA TATGATCCGG TGATTGCGGA GGAAAAAAAT
AACAAGTGA
 
Protein sequence
MDFKDQLKQL GDRVARLKDQ ILTEEATKNA FIMPFIQCLG YDVFNPLEVT PEFIADIGIK 
KGEKVDYAII QDGKPTILVE CKHWSTDLNP HNSQLFRYFH CTSARFSILT NGIHYKFYTD
LVEPNKMDEK PFFEFYIDDL KENQTEKLKE FHKSYFDLDK ILTTASELKY TNEIKNIIAG
DLNEPSDEFT RYFAKLVYPS SVTARILEQF KGLLKKSYQQ FINDTINERL KSALNTQQQQ
EIKEEPAETE IPTGEDAKIV TTEEELEAFH IVRSMLRQKI SAGRIVFRDT QSYFGILLDD
NNRRPLCRVH LNGKRKYLSL FDKDNEERIE IGSVDDIYDY ADQLMKAAVK YDPVIAEEKN
NK