Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6984 |
Symbol | |
ID | 8363176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8747109 |
End bp | 8748197 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644969117 |
Product | protein of unknown function DUF450 |
Protein accession | YP_003126586 |
Protein GI | 256425933 |
COG category | [S] Function unknown |
COG ID | [COG4748] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00893267 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000001532 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGATTTTA AAGATCAGCT CAAACAACTG GGCGACAGAG TCGCCAGACT AAAAGATCAG ATACTGACAG AAGAAGCTAC TAAAAATGCC TTCATTATGC CTTTCATCCA ATGCCTTGGA TACGACGTGT TCAATCCCTT GGAAGTAACG CCCGAATTCA TCGCTGACAT CGGTATCAAA AAAGGTGAAA AAGTAGACTA TGCCATCATA CAGGACGGTA AACCCACTAT CCTCGTGGAA TGTAAACACT GGTCCACTGA TCTCAATCCG CACAACAGCC AGTTGTTCCG CTACTTTCAT TGCACCAGCG CAAGATTCAG CATCCTGACA AATGGCATTC ATTACAAGTT CTACACAGAC CTGGTAGAAC CTAATAAAAT GGATGAAAAA CCCTTCTTCG AATTCTATAT TGATGACCTG AAAGAAAATC AGACAGAAAA GCTGAAAGAG TTTCACAAGA GCTACTTTGA CCTGGATAAA ATATTAACAA CTGCCAGCGA ACTGAAATAC ACCAATGAAA TAAAAAACAT CATTGCCGGT GATCTCAATG AACCGTCTGA CGAGTTCACA CGCTACTTCG CAAAACTTGT TTATCCCTCC TCTGTAACAG CAAGAATCCT GGAGCAATTC AAAGGATTAC TGAAGAAATC CTATCAACAG TTCATCAATG ATACCATCAA TGAAAGACTA AAATCTGCGC TCAATACACA ACAGCAACAG GAGATAAAAG AAGAACCCGC AGAAACAGAA ATACCCACCG GCGAGGATGC AAAAATCGTC ACAACAGAAG AAGAACTGGA AGCATTCCAT ATCGTGCGTT CTATGCTGAG ACAGAAGATA AGTGCAGGCC GTATCGTATT CAGAGATACA CAGTCTTACT TCGGTATCTT ACTGGATGAT AATAACAGAA GACCTTTATG CAGGGTACAC CTGAACGGCA AGCGGAAATA CCTCTCACTG TTTGATAAAG ACAATGAAGA AAGGATTGAA ATTGGAAGTG TAGATGATAT CTATGACTAT GCAGATCAGC TGATGAAAGC AGCGGTGAAA TATGATCCGG TGATTGCGGA GGAAAAAAAT AACAAGTGA
|
Protein sequence | MDFKDQLKQL GDRVARLKDQ ILTEEATKNA FIMPFIQCLG YDVFNPLEVT PEFIADIGIK KGEKVDYAII QDGKPTILVE CKHWSTDLNP HNSQLFRYFH CTSARFSILT NGIHYKFYTD LVEPNKMDEK PFFEFYIDDL KENQTEKLKE FHKSYFDLDK ILTTASELKY TNEIKNIIAG DLNEPSDEFT RYFAKLVYPS SVTARILEQF KGLLKKSYQQ FINDTINERL KSALNTQQQQ EIKEEPAETE IPTGEDAKIV TTEEELEAFH IVRSMLRQKI SAGRIVFRDT QSYFGILLDD NNRRPLCRVH LNGKRKYLSL FDKDNEERIE IGSVDDIYDY ADQLMKAAVK YDPVIAEEKN NK
|
| |