| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6979 |
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| Symbol | murC |
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| ID | 8363171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8740738 |
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| End bp | 8742129 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644969112 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_003126581 |
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| Protein GI | 256425928 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0152734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000420248 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCTGA ACAAAATAAA ACGCATCTAC TTCATTGGCA TAGGAGGCAT CGGCATGAGC
GCTATTGCAC GCTTCTTTAA TGAGAAGGGT ATGCAGGTAA GCGGTTATGA CCGTACCGAA
ACGGCGCTCA CACGCCAGCT GGCAGAAGAA GGCATGCAGA TCCACTATAC AGATGATGTA
CAGCTGGCCG ACCAGCAGGC TGACCTGATC GTGTACACAC CCGCTATACC TGCTTCGCAT
ACAGAACTGA TCTGGTTCCG TGAGAAAGGC TTCGAAGTAG TAAAACGTAG CGACGTATTA
CAGGAGATCA CCAAAGAATT ATACGCGATC ACCGTTGGAG GTACACATGG TAAAACTACC
ACCTCTACCC TGATCGCTCA TATACTCAGA CACACCGGTT ACGGCTGTAA CGCTTTCCTC
GGAGGTATCA GCGCCAACTA TGACCGTAAC TTCTGGAGCA GCGACAAACA GGTAGCTGTA
ATAGAAGCCG ACGAATATGA CCGTTCATTC CTGAAGCTGC ATCCCGATGT GGCAGTACTG
ACTGCCATTG ACGCAGATCA CCTGGATATT TACGGTACAG AAGAAGAAGT ACAGGAAGCA
TTTATACAGT ATACCCGCAA CATCAAAGCA AAAGGCACAC TGGTGGCAAA GCAGGGACTA
CACCGCGCAG CAGAACTGAA AGGGGACAAT CACATATGGT ATCACCTGGA AGACAACAAA
GCTGACATAT ATGCAGCCAA TATACGCCCG GATGAAGGTG GATACAGATT TGATGTAATA
CAGCACAACT GGACACTGAC AGACATCTAC CTTCCGATCG GCGGTACACA CAACATCGAG
AATACAGTAG CAGCAATTGC AGTAGCACAC CTGTTAGGTA TTGCAGATGA AAAGATCAAA
GCAGCAATCG CTGACTTCAA AGGCATCAAA CGTCGCTTTG AATACCTGGT GAAAAATGAT
TACCAGATAT ACATCGACGA TTATGCACAT CACCCGGAAG AACTGCGCGC ACTTATTAGC
AGTGCTCGTG CGTTATTCCC TGACAGAAAA TGTGTCGTGC TGTTTCAGCC TCACCTGTAC
ACACGCACAC GCGACTTTGC AACAGGGTTT GCAGAGAGCC TGTCACTGGC GGATGAAGTA
CTGCTGCTGC CAATCTATCC CGCACGTGAA CTGCCTATAG AAGGTGTACA CAGCGAGATG
ATTGCAAAGA TGATCACAAA ACCCGTTCAG GTAATCCGGA AAGAAGACGT GCTCTCCTGG
GTAAAAGCGA ACAGCGCACC ACTATTTATC ACAGCAGGCG CCGGAGACAT CGATCAGTTC
CGCGAGCCCG TTGAAGAAGT GCTGAACGGA AAAGGCATCG TAGAAAACGA AGAAGTAAAA
AAGAAAGCTT AA
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| Protein sequence | MDLNKIKRIY FIGIGGIGMS AIARFFNEKG MQVSGYDRTE TALTRQLAEE GMQIHYTDDV
QLADQQADLI VYTPAIPASH TELIWFREKG FEVVKRSDVL QEITKELYAI TVGGTHGKTT
TSTLIAHILR HTGYGCNAFL GGISANYDRN FWSSDKQVAV IEADEYDRSF LKLHPDVAVL
TAIDADHLDI YGTEEEVQEA FIQYTRNIKA KGTLVAKQGL HRAAELKGDN HIWYHLEDNK
ADIYAANIRP DEGGYRFDVI QHNWTLTDIY LPIGGTHNIE NTVAAIAVAH LLGIADEKIK
AAIADFKGIK RRFEYLVKND YQIYIDDYAH HPEELRALIS SARALFPDRK CVVLFQPHLY
TRTRDFATGF AESLSLADEV LLLPIYPARE LPIEGVHSEM IAKMITKPVQ VIRKEDVLSW
VKANSAPLFI TAGAGDIDQF REPVEEVLNG KGIVENEEVK KKA
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