| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6963 |
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| Symbol | |
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| ID | 8363155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8724503 |
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| End bp | 8725198 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644969096 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_003126565 |
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| Protein GI | 256425912 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.550727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAG TTGTAGCTAA TGCCGACGAG GCATTGCATG ACATCCGCGA TGGCGCTACC
CTGATGCTGG GCGGATTTGG TTTGTGCGGG ATCCCCGAAA ACAGTATCGC TGCGCTGGTA
CGAAAAGGTA CGCAGCAATT AACATGTATT TCCAATAATG CCGGTGTGGA TGAATTTGGT
CTTGGCCTTT TACTCAAAAC GAGGCAGATC AAAAAGATGT TATCATCCTA TGTAGGTGAA
AATGCTGAAT TTGAAAGACA ACTGCTTTCC GGAGAACTGG AGGTAGAACT GATCCCTCAG
GGGACGCTGG CGACGCGTAT TCAGATGGCA GGTATGGGTA TTCCTGCATT CTTCACACCT
GCCGGTTACG GTACGGAGAT CGCTGCCGGA AAAGAGGTGC GTGAATTCGA CGGTAAACAC
TATCTCATGG AGCTGGCCCT GCATGCTGAT TTTTCCATTG TGAAAGCATG GAAAGGCGAT
ACGATGGGTA ACCTGGTATT CCGCAAAACG ACGCGCAATT TCAGTACTTC TATGGCCAAA
GCAGGCAATA TTACTATTGT GGAAGTGGAG CACCTGGTAC AACCCGGAGA ACTGGATCCT
GACCAGATAC ATGTACCGGG CATTTATGTG CACCGCATCT TCCAGGGAAG TAATTATGAA
AAACGCATTG AGCGGAAGAC CGTGAAAATG GGTTAA
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| Protein sequence | MNKVVANADE ALHDIRDGAT LMLGGFGLCG IPENSIAALV RKGTQQLTCI SNNAGVDEFG
LGLLLKTRQI KKMLSSYVGE NAEFERQLLS GELEVELIPQ GTLATRIQMA GMGIPAFFTP
AGYGTEIAAG KEVREFDGKH YLMELALHAD FSIVKAWKGD TMGNLVFRKT TRNFSTSMAK
AGNITIVEVE HLVQPGELDP DQIHVPGIYV HRIFQGSNYE KRIERKTVKM G
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