Gene Cpin_6953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6953 
Symbol 
ID8363145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8715826 
End bp8716290 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content45% 
IMG OID644969086 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003126555 
Protein GI256425902 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.389804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TTACTATCAG GGACGTACGA AAAGAAGATT GTCCGAGGAT CATGGAGCTC 
ATCAGGGAGC TGGCTGTTTA TGAAAAAGCA CCTGAAGCTG TTACCGTTAC ATTCGAAGAA
TTCGAAGCTG CCGGATTTGG TGAAAATCCG GTATGGAAAG CCTTTGCCGC CGTTCATACA
GACAATGGTC AGGAAACCAT CGTCGGATTC GCCCTCTACT ACATTCGCTA CTCTACCTGG
AAAGGTTGCC GTTTATACCT GGAAGACCTG GTTGTGACCG AAAGCTTCCG TGGAAAACGT
ATCGGCCATC TGCTGTTTGA AAGACTGTTC GAAGAGGTAA GGGAAAAGAA ATTCAACGGT
ATGAACTGGC AGGTACTGGA ATGGAATGAA CCGGCGATTA AGTTCTACAA GAAGCATAAT
GCCTCATTCG ATCCTGAATG GTGGAATGCC AGCATAGATT TATAA
 
Protein sequence
MEKITIRDVR KEDCPRIMEL IRELAVYEKA PEAVTVTFEE FEAAGFGENP VWKAFAAVHT 
DNGQETIVGF ALYYIRYSTW KGCRLYLEDL VVTESFRGKR IGHLLFERLF EEVREKKFNG
MNWQVLEWNE PAIKFYKKHN ASFDPEWWNA SIDL