Gene Cpin_6951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6951 
Symbol 
ID8363143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8714504 
End bp8715199 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content45% 
IMG OID644969084 
ProductNUDIX hydrolase 
Protein accessionYP_003126553 
Protein GI256425900 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.720155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC AATCATTTTA CGCGAATGTA CCTCGGCATC TGGTAGCAGT AGACTGTATT 
ATTTTTGGAT TCCAAAACGG CAAACTTAAA CTGCTGATCA TGCAGCGAAA AGTAGACCCC
ATGCAAGGTG AGTGGTCGCT GATGGGAGGT TTCCTCCAGA ATGGTGAAAG CGTGGATGAA
GCTGCGGAAA GGGTGTTGAA ACAGACAACA GGTCTCGAAA ATATCTATAT GGACCAACTG
TCCTGTTACG GCGACGTGAC CCGTGACAGT GGCGCAAGGG TAATTTCCAT GGCTTACTAT
GCCCTTATCC GCATCAGTGA ACATGAGCAG AATCCTACCC AGCATTTCAG TGCGCATTGG
CTGGAATTGC ACCAGATACC AGATCTTATA TTCGATCACC GGCAGATGAT CGCGGATGCG
CTGAAAAAAC TCAGGGATAA CGCACATTTC CATCCTATCG GATTTGAACT GTTACCGGAG
AAATTTACCC TTTCACAGCT GCGTAGTCTG TATGAGGAGA TCTATCAGAA AGAACTGGAT
AAAAGGAACT TCCGTAAGAA AATCCTCTCG ATGAATGTGC TGGAAAAACT GGAGGAAAAA
GATAAAACAA CCTCAAAAAA AGGCGCTCAT CTATACCGCT TTGACAAAGA GAAATATGAA
GAATTAAAGC AGAGGGGATT GGTCTTTGAG ATATAG
 
Protein sequence
MNAQSFYANV PRHLVAVDCI IFGFQNGKLK LLIMQRKVDP MQGEWSLMGG FLQNGESVDE 
AAERVLKQTT GLENIYMDQL SCYGDVTRDS GARVISMAYY ALIRISEHEQ NPTQHFSAHW
LELHQIPDLI FDHRQMIADA LKKLRDNAHF HPIGFELLPE KFTLSQLRSL YEEIYQKELD
KRNFRKKILS MNVLEKLEEK DKTTSKKGAH LYRFDKEKYE ELKQRGLVFE I