Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6951 |
Symbol | |
ID | 8363143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8714504 |
End bp | 8715199 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644969084 |
Product | NUDIX hydrolase |
Protein accession | YP_003126553 |
Protein GI | 256425900 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.720155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTC AATCATTTTA CGCGAATGTA CCTCGGCATC TGGTAGCAGT AGACTGTATT ATTTTTGGAT TCCAAAACGG CAAACTTAAA CTGCTGATCA TGCAGCGAAA AGTAGACCCC ATGCAAGGTG AGTGGTCGCT GATGGGAGGT TTCCTCCAGA ATGGTGAAAG CGTGGATGAA GCTGCGGAAA GGGTGTTGAA ACAGACAACA GGTCTCGAAA ATATCTATAT GGACCAACTG TCCTGTTACG GCGACGTGAC CCGTGACAGT GGCGCAAGGG TAATTTCCAT GGCTTACTAT GCCCTTATCC GCATCAGTGA ACATGAGCAG AATCCTACCC AGCATTTCAG TGCGCATTGG CTGGAATTGC ACCAGATACC AGATCTTATA TTCGATCACC GGCAGATGAT CGCGGATGCG CTGAAAAAAC TCAGGGATAA CGCACATTTC CATCCTATCG GATTTGAACT GTTACCGGAG AAATTTACCC TTTCACAGCT GCGTAGTCTG TATGAGGAGA TCTATCAGAA AGAACTGGAT AAAAGGAACT TCCGTAAGAA AATCCTCTCG ATGAATGTGC TGGAAAAACT GGAGGAAAAA GATAAAACAA CCTCAAAAAA AGGCGCTCAT CTATACCGCT TTGACAAAGA GAAATATGAA GAATTAAAGC AGAGGGGATT GGTCTTTGAG ATATAG
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Protein sequence | MNAQSFYANV PRHLVAVDCI IFGFQNGKLK LLIMQRKVDP MQGEWSLMGG FLQNGESVDE AAERVLKQTT GLENIYMDQL SCYGDVTRDS GARVISMAYY ALIRISEHEQ NPTQHFSAHW LELHQIPDLI FDHRQMIADA LKKLRDNAHF HPIGFELLPE KFTLSQLRSL YEEIYQKELD KRNFRKKILS MNVLEKLEEK DKTTSKKGAH LYRFDKEKYE ELKQRGLVFE I
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