Gene Cpin_6931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6931 
Symbol 
ID8363123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8679394 
End bp8680278 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content46% 
IMG OID644969064 
ProductMethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_003126533 
Protein GI256425880 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.650439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTT TAGACGGTAA ACTTGTTTCA GCGGCTGTTA AAGCCCAATT GGCAGATAAG 
GTAACTGAAT TGAAAGCGTT GGACAAAAAA GTCCCTCACC TGGCAGCCAT CCTGGTAGGT
AATAATCCCG CCAGCGAAAC TTATGTGGCA TCAAAGGTTA AATCCTGCGC CGAAATTGGT
TTCCACTCCA CCCTTTTACG TTTCGACGAG AAGATTTCTG AAAAACACTT ACTGGACAAT
ATCACATTGC TGAATGAAAA TGCAGATATT GACGGTATCC TCGTACAACT TCCTCTTCCA
AAACATATCA ACGAAGAACT GGTGATCAAC GCCATTGATC CCAGCAAGGA CGTAGATGGT
TTTCACCCGA TGAACGTAGG TAAAATGGTA ATCGGATTAC CTACCTACAT TCCTGCGACT
CCTTATGGCA TCATGCTGAT GCTCGAACAC TACAACATTC CTACAAAAGG AAAACATGCA
GTAGTGATCG GACGAAGCAA CATCGTAGGT ACGCCTATGA GCGTCCTGCT GAGCCGTAAC
GCAAATCCGG GTAACTGCAC CGTAACGCTT ACACACTCCC AGACCGCTAA TCTGAAAGAG
CTTTGCTTAC AGGCAGATAT CATCGTTGCA GCCATCGGTC GCCCGAACTT TGTAACCGCT
GATATGGTAA AAGAAGGCGC TGTTGTGATC GATGTAGGAA TCAATCGTAT CGAAGACGCA
AGCAAAAAGT CTGGCTTCAG ACTGGTAGGC GACGTAGACT TCAATGCAGT AGCACCTAAA
ACCAGTTTCA TCACACCGGT TCCGGGAGGA GTAGGTCTGA TGACCATTGC AGCCCTGCTG
AAAAACACAT ACAACGCTGC AAGCCAGAAA GTAAATATGA ATTAA
 
Protein sequence
MQILDGKLVS AAVKAQLADK VTELKALDKK VPHLAAILVG NNPASETYVA SKVKSCAEIG 
FHSTLLRFDE KISEKHLLDN ITLLNENADI DGILVQLPLP KHINEELVIN AIDPSKDVDG
FHPMNVGKMV IGLPTYIPAT PYGIMLMLEH YNIPTKGKHA VVIGRSNIVG TPMSVLLSRN
ANPGNCTVTL THSQTANLKE LCLQADIIVA AIGRPNFVTA DMVKEGAVVI DVGINRIEDA
SKKSGFRLVG DVDFNAVAPK TSFITPVPGG VGLMTIAALL KNTYNAASQK VNMN