| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6921 |
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| Symbol | |
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| ID | 8363113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8670052 |
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| End bp | 8670609 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644969054 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003126523 |
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| Protein GI | 256425870 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.731688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGCAG AACAAAACGA GCGCATCCAG GAAACGGTGC GACAGGAGCG CAAACGCTTG
CTTCATTTTA TCCGGAAACG GGTTAATAAT GTAGCTGATG CAGAAGATAT CCTGCAGGAT
GTATTTTACC AGTTTACAGA GTATTCACGC GTGGGCAGTC AGATAGATTC TATCACCGCC
TGGCTTTTTA CGGTTACCCG GAATAAAATT ACCGACTGGT TCCGTAAAAA ACGTGAGTCC
ACCTTTAGTG AGCATACCCG CGAATATGAT GGAGAAGAAA GCTTATTCCT TTCAGAAGTG
ATAGCTGACC CGGGTGCGCT GAGTGATGCG CCCATGACCC GTAAAGTAAT AGCAGAGTCT
ATTATGGAAG CTGTCGATGA ATTACCGGAA GAGCAACGTT TTGTGTTCCT GCAACATGAA
ATTGAAGGCA AGTCCTTTAA GGAGATGTCT GCTGAAACTG GTGTGTCCGT CAACACCTTA
TTATCCAGAA AAAGATATGC AGTGCTTTTC CTCCGGGAAC GGCTGGCGGA ACTGTATAAA
GACCTTTTAC AAGATTAA
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| Protein sequence | MAAEQNERIQ ETVRQERKRL LHFIRKRVNN VADAEDILQD VFYQFTEYSR VGSQIDSITA
WLFTVTRNKI TDWFRKKRES TFSEHTREYD GEESLFLSEV IADPGALSDA PMTRKVIAES
IMEAVDELPE EQRFVFLQHE IEGKSFKEMS AETGVSVNTL LSRKRYAVLF LRERLAELYK
DLLQD
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