Gene Cpin_6906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6906 
Symbol 
ID8363098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8648567 
End bp8649514 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content47% 
IMG OID644969039 
ProductMethyltransferase type 11 
Protein accessionYP_003126508 
Protein GI256425855 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.164301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATC CTTCCAAATT ACAGATGCTA GAGAACCGGC TGCTAAAGGT GTACAAACAC 
CTTCGTAAAA CCGCACGCCG GCAGAATATC ACCTGCTTCC GGGTATATGA TGACGATATT
CCAGAATTCC CATTCAGTAT TGAACTGTAT GAGGACCATA TCTATGTAGC GGAATACCAT
CGCCAGCATG GTATGGATGA AGAGGCACAT GAAGAATGGC TGGACCTTTG TCTGGAAGTG
ATCTCCAAAG TACTGGAAGT ACCCCTGGAA AAGATATTTG TCAAGCAACG CCAGCGAAAG
GCGAGCAGAC AGGAACAGTA TGAAAAACTG TCCTTCGAAA GTCATGAAAT GGTGGCGAAT
GAAGCCGGGC TTAAATTCAA GGTAAATCTC TCGGACTACC TGGATACAGG TCTTTTCCTG
GATCACCGTA TTACCCGGGG TATGGTAAGA GAGCAATCCG CAGGCAAAAA GGTACTGAAC
CTCTTCTGTT ATACCGGCTC CTTTTCTGTA TATGCAGCGG CAGGTAATGC GGCACAGGTG
ACTTCTGTGG ATCTGTCTAA AACCTACCTG GCCTGGGCAG AGGAAAACAT GAAGCTGAAT
GATTTTGACG TCAGCAAACA CCAGTTTGTA CACGCCGACG TACTGCAATA CCTGGATACG
CTTCCTGCTG AAACATTTGA CCTCGTTGTG CTAGACCCGC CAACTTTCTC AAACAGTAAA
CGTATGAAGG AGTTCCTGGA CATCCAGCGG GACCATGTCA GCATCCTGAA CAAAGTACTG
GCGGCTACCA GACCAGGCGG TGTCATTTAC TTCAGTAATA ACTACCGTCG CTTTGTGCTG
GAAGCAGACC GTATACTGGC TTCCGAGATC AAAGACATCA CTTCGCAGAC CATCCCTTTC
GACTTTCAGC AAAAGCTGAT CAGAAAGTGC TACAGGATCG TACGCTAA
 
Protein sequence
MFDPSKLQML ENRLLKVYKH LRKTARRQNI TCFRVYDDDI PEFPFSIELY EDHIYVAEYH 
RQHGMDEEAH EEWLDLCLEV ISKVLEVPLE KIFVKQRQRK ASRQEQYEKL SFESHEMVAN
EAGLKFKVNL SDYLDTGLFL DHRITRGMVR EQSAGKKVLN LFCYTGSFSV YAAAGNAAQV
TSVDLSKTYL AWAEENMKLN DFDVSKHQFV HADVLQYLDT LPAETFDLVV LDPPTFSNSK
RMKEFLDIQR DHVSILNKVL AATRPGGVIY FSNNYRRFVL EADRILASEI KDITSQTIPF
DFQQKLIRKC YRIVR