Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6904 |
Symbol | |
ID | 8363096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8646659 |
End bp | 8647216 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644969037 |
Product | GrpE protein |
Protein accession | YP_003126506 |
Protein GI | 256425853 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.150675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.298497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACAA ACGGACAGGA CACCGAAAAT GGTAAAGGCA TGCCGGATAT TAACGCTGAA GAGAACCTGG GCGGCACCAC AAACCTTAAC GATGCCTTGG CGGATGAAAG CGAACTGGAT AAAAAACAGC AGGAGCTGAA TGAAATGAGG GATAAATACC TTCGTCTGGT TGCAGAATTT GACAATTTCA AGAAACGTAC TGCTAAAGAA CGTATCGAGC TGATGCAGAC TGCCAACAAA GAGGTAATCA TCTCGTTACT GGATGTACTG GATGATAGTG AACGTGCCAC AAAACAAATA GAAAGCGCCG CTGATATCAA TGCCGTAAAA GATGGCGTTG CACTGGTTTT CAATAAATTA AAGTCGACCC TGCAAGCTAA GGGCCTTAAA CCTATGGAGA GTTTGCACAC CGAATTTAAT CCCGATCTCC ACGATGCCAT CACTGAGATT CCCGCACCTT CTGAGGATCT GAAAGGAAAG GTGATCGATG ATATGCAGAA AGGATATTAC CTGAATGACA AATTGATACG TCACGCCAAG GTAATAGTGG GAAAATAG
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Protein sequence | MQTNGQDTEN GKGMPDINAE ENLGGTTNLN DALADESELD KKQQELNEMR DKYLRLVAEF DNFKKRTAKE RIELMQTANK EVIISLLDVL DDSERATKQI ESAADINAVK DGVALVFNKL KSTLQAKGLK PMESLHTEFN PDLHDAITEI PAPSEDLKGK VIDDMQKGYY LNDKLIRHAK VIVGK
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