Gene Cpin_6904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6904 
Symbol 
ID8363096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8646659 
End bp8647216 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content44% 
IMG OID644969037 
ProductGrpE protein 
Protein accessionYP_003126506 
Protein GI256425853 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.150675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.298497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAA ACGGACAGGA CACCGAAAAT GGTAAAGGCA TGCCGGATAT TAACGCTGAA 
GAGAACCTGG GCGGCACCAC AAACCTTAAC GATGCCTTGG CGGATGAAAG CGAACTGGAT
AAAAAACAGC AGGAGCTGAA TGAAATGAGG GATAAATACC TTCGTCTGGT TGCAGAATTT
GACAATTTCA AGAAACGTAC TGCTAAAGAA CGTATCGAGC TGATGCAGAC TGCCAACAAA
GAGGTAATCA TCTCGTTACT GGATGTACTG GATGATAGTG AACGTGCCAC AAAACAAATA
GAAAGCGCCG CTGATATCAA TGCCGTAAAA GATGGCGTTG CACTGGTTTT CAATAAATTA
AAGTCGACCC TGCAAGCTAA GGGCCTTAAA CCTATGGAGA GTTTGCACAC CGAATTTAAT
CCCGATCTCC ACGATGCCAT CACTGAGATT CCCGCACCTT CTGAGGATCT GAAAGGAAAG
GTGATCGATG ATATGCAGAA AGGATATTAC CTGAATGACA AATTGATACG TCACGCCAAG
GTAATAGTGG GAAAATAG
 
Protein sequence
MQTNGQDTEN GKGMPDINAE ENLGGTTNLN DALADESELD KKQQELNEMR DKYLRLVAEF 
DNFKKRTAKE RIELMQTANK EVIISLLDVL DDSERATKQI ESAADINAVK DGVALVFNKL
KSTLQAKGLK PMESLHTEFN PDLHDAITEI PAPSEDLKGK VIDDMQKGYY LNDKLIRHAK
VIVGK