Gene Cpin_6901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6901 
Symbol 
ID8363093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8644274 
End bp8644744 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID644969034 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003126503 
Protein GI256425850 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0101292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.378229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAA CAGTTGGCGC AAAAGCTCCC TCTTTTTCAC TGCTGAATAC CGAAAAACAG 
AAAGTATCCC TGGAAGACTT CAAAGGTCAG AACCTGGTAA TCCTGTTTTT CCCATTGGCA
TTTACAAGTG TATGTACAGC AGAACTCTGC AGTATCAGAG ATAACATCGG TACTTATAAC
GACCTGAATA CAGCCGTTGT AGGTATTTCT GTAGACTCTC CTTTTACCCT GGGTAAATTT
AAGGCTGAGC AGAACCTGAA CTTCCCGTTG CTGTCTGACT TCAATAAAGA CATTTCTCAG
GCATACGGTG CATTTTACGA GAATTTCGTC CTGGATCTGA AGGGTGTATC TAAAAGATCA
GCGTTCGTGG TAGACAAAGA AGGTGTTGTC AGATATGCGC AGGTGTTAGA GTCAGCAGGT
GACCTGCCTG ATTTTGAGGC AGTTAAAAAC ACGCTGAACG GCCTGCAATA A
 
Protein sequence
MNVTVGAKAP SFSLLNTEKQ KVSLEDFKGQ NLVILFFPLA FTSVCTAELC SIRDNIGTYN 
DLNTAVVGIS VDSPFTLGKF KAEQNLNFPL LSDFNKDISQ AYGAFYENFV LDLKGVSKRS
AFVVDKEGVV RYAQVLESAG DLPDFEAVKN TLNGLQ