| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6899 |
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| Symbol | |
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| ID | 8363091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8638297 |
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| End bp | 8643117 |
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| Gene Length | 4821 bp |
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| Protein Length | 1606 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644969032 |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003126501 |
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| Protein GI | 256425848 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.776469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.805728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGTGT TCCTCCTGCT ATGCGGTGCT AAGACACAGG CACAAAATAC CGTAGCTTTT
ACTGCTGACA ACTGGAGTGG TTGCGGTGCA GCCTTCGTTC AATTTGTAAA TCAGTCTACA
CCCGTTGGTA CCGCTTCATG GGACTTCGGA GACGGGGGAG CCAGATCAAC TTTATGGAAT
CCCAGCCGAA CATTCAACAG ACCTGGTGTT TTCAACGTTG TACTGACTGT TACCTTTCCA
AATGGACAAG TCAGCAGCAC CCAACATGTT GTAAACGTCT ATCGCAGACC CAATGTTGTC
TTTACCGCTA CTCCTACCAC CGGATGTACG CCACTGACTA TTAACTTCCG CGACCAGTCA
TCAGCAGGAG ATGGTACGAT TACAGGTATC AGCTGGGATT TCGGGGACGG TACCGGCGCC
AATGGCGCTA CCGCCAGCCA TACTTATAAC AAAGGCGGCG GCATGATTGC TACTTCCATT
GTGACCAACA GCTTTGGTTG TACCTCCAGT GCCGAACAGA TTCTGGATAT CAAACCTACG
CCACAGGTTT CCTTTACCAC TAATACACAA GGGGGCTGCC GTACACCGGT AACTGTCAAC
TTCACCAATA CCACTACCAT GAACACTGCC GGACCAGTAC CGACAGTGAA CTACCTGTGG
GATTTCGGAG ATGGTAGTAC CAGCACCGAC ATGCACCCTA CGCATGATTA TACCACCACC
GGCAATTTCT CTGTAAAACT GACGGCATCT ACTGCTGATG GCTGTACCCA GACCATCAAC
ATGCCTGATT ATATCAAGAT TGCTACTATG CAGGCGGATT TCAACATCCT GGAAAAAACC
TGTACCGGTA CCAACATTAC TTTTAGAAAC ACTACATTAC CAGCACCGGT ATCTGCAACC
TGGACCTTCT CTGATGGTAC GGTAATAAAC GCGGTAAATG CGGTAAGAAG CTTTGCCGCC
GCCGGTAACT ATACCGTTAC CATGCACGCG GTAACACAGG ATGGTTGCGA TGCGCTGGTG
ACCAGAAGCT TTACTGTTTC CACACCTCCT ACTGTCAATT TCACCATGAA CCCTACATCT
GCCTGTGCGG TTCCCGTGAA TATCCAGTTT ACCACTACCA GCACAAATGC AAATGGCTGG
GCATGGACTT TCGGAGATGG TAGTACGGCT ATTATCCAGA ACCCGCTGCA CAATTTTACC
ACGGAAGGCG TCTACCCGGT AAAAGTAGTG GCCAGTAATG CTTCCGGCTG TCTCGATTCA
GCCATCAACT CCATTACCAT CAGAAAACCT GTACTGACCA TCACGGGTCT CAACCGCGGG
TGTGTACCTT TTGATGCCAG TCTGACTGCC AACATTGACG TGGCAGATCC GATCGTGTCT
TATGACTGGG ATTTCGGTGA CGGCGGATCT TCTACCAATT CAGTCGGCAC ACATACCTAC
ACCGCTCAGG GTAACTATGT AGTGCGACTT AACATTACTA CCAGAGGTGG TTGTACACAA
ACTGCCACTT ACCCGATCAG GGTAGGTACC CCGGTAATAC CTGATTTTTC TGTGGATAAG
CCCAATGGTT GTCAGCCGAC TATATTCAAC TTTACCGACC TGTCCAGACC ACAGGTGCCT
GGTATGACCT GGCAATGGAC ATTCGTAGAA AACGGTGCAG CCAATGGCGG TTCTTCTGTA
CAGAATCCAT CTTATGTATT CACCACTATC GGTACACATG ACGTGATCCT GACGGTAGAT
AACAACGGTT GTACACGGAC CATTACTAAA CTGGCCTTTG TGGAAGTATA CCCACCTGCC
GCCTTCTTCA CTATTGCTGA TGTGGATTGT AGCAGACCGC TGACACGCGT ATTTACAGAC
GCTACGGCCT GGGGTACGAC TCCTACACCA AGAAGTTATT CGTGGGATTT CGGAGACGGT
ACGACTGACA ATACGCCAAA TCCAACGCAT ACATGGGCGA ATGAAGGCAC TTATACCGTC
GTACTGACCG TGGACAACGG TAGCTGTACG TCCACCTATT CTACTACGGT AAGGATACTG
AACGACAAAC CATCCATCAC TGTTGATCAA AATGTGATCT GCCGTGGCAC CACTGTAAAT
TTTGCTACTA CCTCGCTGAT ACCTGGTCTT ACGACCTCTT ACCAGTGGAC CTTCGGCGAT
GGCGGTACAA ACGCCGGTTC ACCGACACCA GCCTATACTT ACAGTCAGCC GGGTACTTAT
AAAGCAGCGC TGACTACCGT AGACATCTAT GGTTGTACAC ACGTATCAGA TTCTCTCACG
ATCGATGTAA ATGGTTCTGT TGCAGCATTC TCCGCTTCCG CACGCCGATG CAGAGACACT
TCCATTACGT TCACCGATGA ATCTACCACC CGCGCCGGTA ATACCATCAC TTCCTGGACA
TTTAACTTTG GTGACGGTAC CCCAAGACAG ACATTTATTA CACAACCAGT GGCTATACCG
CATAGCTACG GTGTTATCAA TAACTATCCT GTTACACTTA TTGTAACTGA CAATACCGGT
TGTACGGATT CTATTACGCA TGTCATCACC ATTGACAACA TCGCCGCAAA ATTCAGTGCA
CCAGATAGCA TTGCCTGTCT GAATACACCG TTCCGATTCA ATAACGAGTC TATTACAGAA
CCGCTGACTT ATGCATGGCA ATTCGGAGAC GGTGGTGTCA GCACAGACAA AAATCCAACG
CATACCTATA CTATACCTGG TACTTATACG GTGATACTGG ATGTTACCAG CACCACAGGT
TGTACCGGCC ATATTGAGAC AAAAGACTTC CTGAGAGTGC CTAATCCGGT AGCTGACTTT
GAGGTACCTG CTGTAGCAGG TGATATTTGT CCGCCGGTAA AAGTGCAGTT CACCAACCAC
TCTTCCGACT ACGTGAAAGT ATCCTGGTCA TTCGGAGATG GCAGCAGTTC AGATGAAGAC
AATGCTTTAC ATAACTATAT CAGACCTGGT AATTTCCCGG TAACCCTGAC GGTTTACTCT
GAAGGCGGAT GTGCCAGTCC GACAGCAGGA CCTAAGAACA TTTCTATCTC TGGTCCGGAT
GGTAGCTTCT CTATTTCCCA GGAAAGAGGT TGTGTACCAT TAACTACTTC TATGACAGCT
GTTTCTCCGA CCGCACAGAA ATTCATCTGG GATTTTGGAG ATGGATATAC CGTGACGACG
ACGACTCCTG CATCACCTTC TTACACTTAT ACACAGCCAG GTATTTATTT CCCGGCTGTA
TTGCTGGAAG ACCAGAGAGG ATGTACCGTA CCGGCTATTG GTAATCCGAA AGTCGTTGTA
GATCAGATCA AAGCCGATTT CGGATATGAC CTTTCGAACG CTTGTGACGG AGGTATTGTA
CAATTCTCGG ATTCAACAAA AGGCGTGTCT ATTGAAGATG GATCTCCGGC TACTTACCTG
TGGGATTTCG GTATTCCGGG TCGTACAGAC GATGTGGGTA CAGGGCCTAA TCCAAGCTTC
TTGTATGATG CACCGGGCAC TTATACTGTG AAAATGATCG TGACCAGTTA CTATGGTTGT
GTGGATGAAA TAACGAAGAC CCTTATTATC GAACCGAATC CATATCCTGA AATTGACTCT
GTACCACCGG TATGTGTGGG TACGCCGATT CAGTTGTCAG GACGTGAAAT CAGGAATCTG
CCCGGAACGA TCTGGAACTG GACGACCAAT GGACAGGATT ATCCGGGACA GGTACCGGAT
TCGGTTACCT ATGACCAGCC AGGCATTTAT CCGGTACAAC TGACGATTAT CAGTGCAAAA
GGCACCTGTA GTGCAACAGT GACAAGGGAT ATTACGGTAG CGCCTTATCC AACCCTTACA
CCAACACCGG CGGAATCTTC GATCTGTCGT GGAGAATCGG TGAACTTGCG GGTATTTACA
GAACCAGGAG CCGATATCAC CTGGACCAAC TATAACATTT CAGATCCAAA GAGCGCTACC
CCGGTAGTTA CACCTGATAT AGATACCACT TACCGTGTGA CGGTGGTGAA TGCGACCGGT
TGTGCGGCAA AAGGCAGTGT GAAGATCAGT GTGTCTCAAC CATTTACCAT ACAGGCAAGT
AATGCAGATA TCTGCGAAGG CGGTTCCGTA CAGTTACATG CCAGTGGCGC TGTAAGTTAT
AAATGGTCGC CGGAAACAGG TCTGGACAAA TCTGATGTGG ATAACCCGAT GGTAACCCCG
GAATCCACTA TCAGCTATCA GATCATCGGA TATGGTAATG ACAATTGCTT TACGGATACA
GCTACAGCTA CGGTAACAGT ACATTCCGCG CCTATTATCA ATGCGGGAGA TGACCTTTCC
GTGCCGGTAG GTACGACAAT ACAGTTGCCG GTGACCGGTA GCACCGATAT TACGAAAATC
GAGTGGACGC CGGCGGCAAG CCTGAGTTGT GCGGACTGTC TGACACCGAC AGCTTCTCCA
AGAGAGAATA CCACTTACCT GATAACGGTG ACCAATGCAT TTGGTTGTAC GAGTTCGGAT
GATGTAACGG TAAACCTGGT ATGTTCTTCC GGTGTGGTGT TCCTCCCCAA CACCTTCTCC
CCTAACAATG ATGGACAGAA TGATCTGTTC TACATCAGAG GTAAGGGTAT CAAAGTGGCG
AAATCATTTA AGATATATAA CCGTTGGGGA CAACTGGTAT TCGAAAGGAC CAACTTTAAC
ATAGAGGATC CAACTTACGG CTGGGACGGT CGCATGAACG GTCAACCGGC AAATCCGGAT
GTCTTTGTGT ATGTAGCAGA ACTGATATGT GATTCCAATG AAGAATTTAT GTTAAAAGGA
AATGTGATGC TGATCAGGTA G
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| Protein sequence | MVVFLLLCGA KTQAQNTVAF TADNWSGCGA AFVQFVNQST PVGTASWDFG DGGARSTLWN
PSRTFNRPGV FNVVLTVTFP NGQVSSTQHV VNVYRRPNVV FTATPTTGCT PLTINFRDQS
SAGDGTITGI SWDFGDGTGA NGATASHTYN KGGGMIATSI VTNSFGCTSS AEQILDIKPT
PQVSFTTNTQ GGCRTPVTVN FTNTTTMNTA GPVPTVNYLW DFGDGSTSTD MHPTHDYTTT
GNFSVKLTAS TADGCTQTIN MPDYIKIATM QADFNILEKT CTGTNITFRN TTLPAPVSAT
WTFSDGTVIN AVNAVRSFAA AGNYTVTMHA VTQDGCDALV TRSFTVSTPP TVNFTMNPTS
ACAVPVNIQF TTTSTNANGW AWTFGDGSTA IIQNPLHNFT TEGVYPVKVV ASNASGCLDS
AINSITIRKP VLTITGLNRG CVPFDASLTA NIDVADPIVS YDWDFGDGGS STNSVGTHTY
TAQGNYVVRL NITTRGGCTQ TATYPIRVGT PVIPDFSVDK PNGCQPTIFN FTDLSRPQVP
GMTWQWTFVE NGAANGGSSV QNPSYVFTTI GTHDVILTVD NNGCTRTITK LAFVEVYPPA
AFFTIADVDC SRPLTRVFTD ATAWGTTPTP RSYSWDFGDG TTDNTPNPTH TWANEGTYTV
VLTVDNGSCT STYSTTVRIL NDKPSITVDQ NVICRGTTVN FATTSLIPGL TTSYQWTFGD
GGTNAGSPTP AYTYSQPGTY KAALTTVDIY GCTHVSDSLT IDVNGSVAAF SASARRCRDT
SITFTDESTT RAGNTITSWT FNFGDGTPRQ TFITQPVAIP HSYGVINNYP VTLIVTDNTG
CTDSITHVIT IDNIAAKFSA PDSIACLNTP FRFNNESITE PLTYAWQFGD GGVSTDKNPT
HTYTIPGTYT VILDVTSTTG CTGHIETKDF LRVPNPVADF EVPAVAGDIC PPVKVQFTNH
SSDYVKVSWS FGDGSSSDED NALHNYIRPG NFPVTLTVYS EGGCASPTAG PKNISISGPD
GSFSISQERG CVPLTTSMTA VSPTAQKFIW DFGDGYTVTT TTPASPSYTY TQPGIYFPAV
LLEDQRGCTV PAIGNPKVVV DQIKADFGYD LSNACDGGIV QFSDSTKGVS IEDGSPATYL
WDFGIPGRTD DVGTGPNPSF LYDAPGTYTV KMIVTSYYGC VDEITKTLII EPNPYPEIDS
VPPVCVGTPI QLSGREIRNL PGTIWNWTTN GQDYPGQVPD SVTYDQPGIY PVQLTIISAK
GTCSATVTRD ITVAPYPTLT PTPAESSICR GESVNLRVFT EPGADITWTN YNISDPKSAT
PVVTPDIDTT YRVTVVNATG CAAKGSVKIS VSQPFTIQAS NADICEGGSV QLHASGAVSY
KWSPETGLDK SDVDNPMVTP ESTISYQIIG YGNDNCFTDT ATATVTVHSA PIINAGDDLS
VPVGTTIQLP VTGSTDITKI EWTPAASLSC ADCLTPTASP RENTTYLITV TNAFGCTSSD
DVTVNLVCSS GVVFLPNTFS PNNDGQNDLF YIRGKGIKVA KSFKIYNRWG QLVFERTNFN
IEDPTYGWDG RMNGQPANPD VFVYVAELIC DSNEEFMLKG NVMLIR
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