| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6896 |
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| Symbol | |
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| ID | 8363088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8634703 |
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| End bp | 8635797 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644969029 |
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| Product | protein of unknown function DUF34 |
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| Protein accession | YP_003126498 |
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| Protein GI | 256425845 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0327] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0175851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATCA GGGATATTAC CAATGCCATA GCGGCATTTG CACCATTACA ATACCAGGAA
AGTTATGACA ATGCAGGATT GCTGTTCGGC AGTGCCGACT GGGAACTGAC AGGCGTATTA
CTGACGCTGG ATGCTACGGA AGCCGTTATC GACGAAGCCA TCGAAAAGAA GTGTAACCTC
GTGGTGGCGC ATCATCCGAT CGTATTCGGC GGACTAAAAA AGATCAATGG AAACAATTAT
GTAGAGCGGG TGGCTATCAA GGCTATCAAG AACGATATTG CCATTTATGC AGCTCATACC
AACCTGGATA ATGTGCGGAA CGGTGTTTGC AATATGATGG CGCAGCGATT GGATTTACAG
CAATGCAGTG TGCTGTCCCC TAAGCGGGAG CTGCTGCGAA AACTGTATAC CTTTGTGCCC
CAGGCAGCTG CGGAGAAGGT AAGAGCTGCC CTTTTTGCTG CCGGAGCCGG ACATATTGGC
GCTTATAATG AGTGCAGCTA TAATGTGGAA GGAACCGGTA CGTTTAAAGC AGGAGCAGGT
ACTAATCCGC ACGTAGGCGA GATCGGGCAG CGTCATATGG AGCCGGAAAC AAAGGTGGAG
GTGATTTTTC CCGTATATTT GGAGAATGCG GTGGTAAAAG CCCTGTTGGG AAGCCATCCA
TATGAAGAGG TGGCTTATGA TATTGTGAAA CTGGAGAATG CATATGCAGA AGTGGGTTCG
GGACTGATCG GGGAACTGAA AGCGCCCATG GAGGAAGAAA CCTTCCTGCG CTGGGTAAAG
CAGCAGTTCA ATACAGGTTG TGTGAGATAT ACGCCCCTGA GAGGTCGTCC GGTGAAGAAA
GTGGCATTGT GCGGAGGAGC GGGCAGTTTC CTGTTAAAAA GGGCGATTTC GGCAGGGGCA
GATGCCTATA TTTCTGCTGA TTTCAAATAT CATGAGTTTT TTGATGCTGA AAATCAAATT
GTTATAGCGG ATGTAGGACA TTTCGAGAGT GAGCAGTTTA CGGTTGAATT ATTTTATCAT
ATATTGACTG AAAAATTCCC TAATTTTGCG CCTCTTAAAT CTACAATTCG TACAAATCCG
GTAAATTACT TATAA
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| Protein sequence | MKIRDITNAI AAFAPLQYQE SYDNAGLLFG SADWELTGVL LTLDATEAVI DEAIEKKCNL
VVAHHPIVFG GLKKINGNNY VERVAIKAIK NDIAIYAAHT NLDNVRNGVC NMMAQRLDLQ
QCSVLSPKRE LLRKLYTFVP QAAAEKVRAA LFAAGAGHIG AYNECSYNVE GTGTFKAGAG
TNPHVGEIGQ RHMEPETKVE VIFPVYLENA VVKALLGSHP YEEVAYDIVK LENAYAEVGS
GLIGELKAPM EEETFLRWVK QQFNTGCVRY TPLRGRPVKK VALCGGAGSF LLKRAISAGA
DAYISADFKY HEFFDAENQI VIADVGHFES EQFTVELFYH ILTEKFPNFA PLKSTIRTNP
VNYL
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