| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6895 |
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| Symbol | |
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| ID | 8363087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8633942 |
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| End bp | 8634694 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644969028 |
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| Product | protein of unknown function DUF164 |
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| Protein accession | YP_003126497 |
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| Protein GI | 256425844 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
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| TIGRFAM ID | [TIGR02202] Ehrlichia chaffeensis immunodominant surface protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.13301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTACTG TAAAAGAATA CTCCGTAGAA GAAAAATTGG CGTCTGTGCT TAGGCTACAG
AAGATGGACT CCAGACTGGA TGAAATCCAG GTGTTGAAGG GAGAGTTGCC GATGGAAGTA
AAGGATCTTG AAGATGAGAT AGAGGGTCTG AACACCCGTC TGGCTCACGT AGAGGATGAA
ATCCGTGGTA TCCAGGACTT TATTGCCAAT AAGAAAACGG CAATCAAAGA CTCAGAGGCC
CTGATGAAGA AATACGAGAA GCAGCAGGAT AACGTTAAGA ATAATCGTGA ATTCGAAGCC
ATCACAAAAG AGATTGAAAT GCAGTCTCTG GAGATCAAAC TGGCAGAGAA ACATATTAAA
GACGCGAACG AAGAGGTAAA GGATAAGAGC CGTGTCCTGG AAGGTGCTAA GAAACAGATT
GCAGATAAAG AATCTAACCT GAAGCACAAG AAAGGTGAAC TGGAAAAGAT CATCGGTGAA
ACTGAAAAAG AAGAGAAAGC TTTCCGTAAG CAGAGCGATG AAGCACGTAC TAAAGTAGAA
GCACGTCTGC TGGGCGCTTA TGAAAAGATC CGTACCAACT ACCGTAACGG TCTTGCTGTA
GTAACAATCT CCCGTGACTC CTGTGGTGGT TGCTTTAATG CGATCCCTCC TCAACGTCAG
GCGGAAATCC GTCAGCGTAA AAAGATCATC GTGTGTGAAC ATTGCGGTCG TATCCTGGTT
GATAATGACC TGGATGCTAC AGTGACTATC TGA
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| Protein sequence | MATVKEYSVE EKLASVLRLQ KMDSRLDEIQ VLKGELPMEV KDLEDEIEGL NTRLAHVEDE
IRGIQDFIAN KKTAIKDSEA LMKKYEKQQD NVKNNREFEA ITKEIEMQSL EIKLAEKHIK
DANEEVKDKS RVLEGAKKQI ADKESNLKHK KGELEKIIGE TEKEEKAFRK QSDEARTKVE
ARLLGAYEKI RTNYRNGLAV VTISRDSCGG CFNAIPPQRQ AEIRQRKKII VCEHCGRILV
DNDLDATVTI
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