| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6894 |
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| Symbol | |
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| ID | 8363086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8632307 |
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| End bp | 8633794 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644969027 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003126496 |
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| Protein GI | 256425843 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.317452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.840433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATAT TATTCCTGCT GGGGTTATTA TTGAATATTA CTATTTCTGT ATCAGGGCGT
CAGAAGGTCT ATGACTTTAA CACCCGTTGT CAGCAGGCCT ACGATGCGAT CATGCAATTG
CGGCTCGATG CCGGAGCAGC CCTGCTGGCA GAAGAAAAGA AAGCCAATCC TGATAACCTC
ATTCCTTATT TCCTGGAAAA TTATGCTGAC TTTTTTACCC TCTTCTTTAA TGAAGATCCG
GCGGAGTATG CCCGGAAGAA ATCATTGAAA GCCGACCGTG TGGCGTGGAT GGAAGAAGGG
CCGACCAATT CACCTTACTA TCTGTATACC CAGGCAGCCA TCCGTTTCCA GTGGGGAATG
GTGAGACTGA AATTTAACGA ACGCTGGGAT GCGGTATGGG AAATCAGGAA AGCCTACCAG
TTATTGAAAG AGAATCAGAA GAAGTTTCCG CAGTTTTTAC CTAATAATAT GTTGCTGGGC
TCTATGCAGA CCGTATTCGG GACCATTCCT GAAGGGTATC GCTGGCTGTC CAATACCCTG
GGAATGAAAG GTACGATAAG AGATGGTATG CAGATGGTGC AGCAGGTGAT TGACAGTAAT
ACGGAAGTAG CCCGCCTGTT CAAGGAAGAG GCCTGTTATT ATTACTGTTA CCTGAAATTG
TTTGTGGAAA ACAAGCCTGA AGATGTCTGG GCATTTCTCC AGAAACACCA GCTGGATACA
AAAAATAACT ATCTTTTCGC CCTGATGGTG GCCAATATTG CGATGAATAA TCAGAAGGCT
TCATTGGGTA TCAAGGTGTT GACAGAGCGG AATGATAATG CGCAGTATGA AGAGATCCCA
TATGTATATT ATGTACTGGG GCAACTGAAA CTGTGCCGGC AGGATGAAGA TGCGAATGTC
TATCTGCAAA AATTTATAGA CCGGTTCAAA GGGAAATTCT ACCTTAAGGA AGGATTACAG
CGTCTGAGCT GGTATTATTA TTTAAGGGGG AATATGGATG CGGCCAATAA ATACCGTAGC
CTGATCCTGA CGAGAGGTAA TACTGAAACA GATGCTGATA AACAGGCGTT GAAAGATGCA
AAGAATGGCA GATGGCCTAA TCAGCTTTTA CTCAAAGCCC GTTTGCTGAG TGATGGTGGT
TTCTTCCCGG AAGCGCTGAA ACTGTTACAA ACAAAAAAAG CGGCTGATTT TCCTGTGATG
GAAGAAAAGC TGGAATATGC TTACCGTCTG GGCCGTATTT ATGATGAAAT GGGCCAGGAT
GATAATGCGA TTACGATGTA TGAGGCGACA GTGAAGGCGG GCGCCAACAG AACGGAACAT
TTTGCCGCAA GGGCTTCCCT GCAAATGGGA TATATTTATG AAAAGCGCAA TGACAAGAAT
AAGGCGCGGC AATGTTACCA GGCCTGTCTG GATATGAAAG GGCACGACTA TAAAAACTCA
CTCGATCAAC GGGCCAAAGC CGGGATACAA CGAATGAACG GCGGTTGA
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| Protein sequence | MRILFLLGLL LNITISVSGR QKVYDFNTRC QQAYDAIMQL RLDAGAALLA EEKKANPDNL
IPYFLENYAD FFTLFFNEDP AEYARKKSLK ADRVAWMEEG PTNSPYYLYT QAAIRFQWGM
VRLKFNERWD AVWEIRKAYQ LLKENQKKFP QFLPNNMLLG SMQTVFGTIP EGYRWLSNTL
GMKGTIRDGM QMVQQVIDSN TEVARLFKEE ACYYYCYLKL FVENKPEDVW AFLQKHQLDT
KNNYLFALMV ANIAMNNQKA SLGIKVLTER NDNAQYEEIP YVYYVLGQLK LCRQDEDANV
YLQKFIDRFK GKFYLKEGLQ RLSWYYYLRG NMDAANKYRS LILTRGNTET DADKQALKDA
KNGRWPNQLL LKARLLSDGG FFPEALKLLQ TKKAADFPVM EEKLEYAYRL GRIYDEMGQD
DNAITMYEAT VKAGANRTEH FAARASLQMG YIYEKRNDKN KARQCYQACL DMKGHDYKNS
LDQRAKAGIQ RMNGG
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