Gene Cpin_6892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6892 
Symbol 
ID8363084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8629675 
End bp8630487 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content45% 
IMG OID644969025 
ProductEnoyl-(acyl-carrier-protein) reductase (NADH) 
Protein accessionYP_003126494 
Protein GI256425841 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.222552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.451935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCATA ACTTATTAAA AGGAAAGAAA GGTATCATAT TTGGTGCATT GGACGAGAAG 
TCTATGGCTT GGAGCACAGC ATTACGTTGT GTGGAAGAAG GCGCCGAAGT AGTGCTTACC
AATGCTCCTA TAGCGTTACG CATGGGAGAG ATCAACAAAC TGGCTGAACA GTGTAATGCT
CCTGTTATAC CCGCTGATGT TACCAATATG GATGATCTGA AAAACCTTTT CACTAAATCC
ATGGAGCATT TTGGCGGCAA AATTGATTTC GTACTGCACT CTGTGGGTAT GAGTATCAAC
ATGCGTAAGG GCAGATCTTA CACCGACCTG GATTATGACT TCTCTCATAA AACATTCGAT
ATCTCCGCTA TGTCCCTGCA CCGTGTGTTG CAGACTGCAT ATCAGCTGGA TGCACTGAAT
GACTGGGCCT CAGTAGTAGC GCTGAGCTAC ATCGCTGCAC AGAGAGTATT CCCTGACTAC
AGCGAAATGG CAGATGCTAA ATCTATGCTG GAATCAGTAG CACGTAGCTT CGGTTACCAC
TATGGTATGA AGAAGAAAGT ACGTGTAAAC ACTATCTCAC AGTCTCCTAC CAAAACTACT
GCAGGTGGTG GTGTGAAAGG TTTTGATGGT TTCATGGAAT ATGCTGAGAA AATCAGCCCG
CTGGGTAATG CTACCGCACA ACAGTGCGCT GATTACTGTG TGGTAATGTT CTCTGACATG
ACCAAAATGG TAACGATGCA GAACCTGTTC CATGATGGCG GTTTCTCATT TACCGGTGTT
TCTGCTGCAA TCATTGAGCA GATGGAAAAA TAA
 
Protein sequence
MAHNLLKGKK GIIFGALDEK SMAWSTALRC VEEGAEVVLT NAPIALRMGE INKLAEQCNA 
PVIPADVTNM DDLKNLFTKS MEHFGGKIDF VLHSVGMSIN MRKGRSYTDL DYDFSHKTFD
ISAMSLHRVL QTAYQLDALN DWASVVALSY IAAQRVFPDY SEMADAKSML ESVARSFGYH
YGMKKKVRVN TISQSPTKTT AGGGVKGFDG FMEYAEKISP LGNATAQQCA DYCVVMFSDM
TKMVTMQNLF HDGGFSFTGV SAAIIEQMEK