| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6887 |
|---|
| Symbol | |
|---|
| ID | 8363079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8626383 |
|---|
| End bp | 8626673 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644969020 |
|---|
| Product | glutamyl-tRNA(Gln) amidotransferase, C subunit |
|---|
| Protein accession | YP_003126489 |
|---|
| Protein GI | 256425836 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
|---|
| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.213024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTGA ATGAGATGCT GGTACAGCAA CTGGCAGACC TTGCAAGGCT TGAGTTTAGC
GAACAGGAAA AGACTGAAAT TAAAGGAGAT CTGCAACGTA TGATCACCTT CGTAGAAAAA
CTGAACGAGC TGGATACCAC TAACGTAAAA CCATTATTAC ACATGACAGC AGACAGGAAT
GTGCTGAGAG AAGACGTGGT AGTTCCTTCC ATAACCCGGG AAGAAGGCTT ACAGAATGCG
CCTGCTGCGA ACGATCAGTA CTTCAAAGTA CCGAAAGTTA TCAAGAAGTA G
|
|---|
| Protein sequence | MEVNEMLVQQ LADLARLEFS EQEKTEIKGD LQRMITFVEK LNELDTTNVK PLLHMTADRN
VLREDVVVPS ITREEGLQNA PAANDQYFKV PKVIKK
|
|---|
| |