| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6878 |
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| Symbol | |
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| ID | 8363070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8612373 |
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| End bp | 8615609 |
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| Gene Length | 3237 bp |
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| Protein Length | 1078 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969011 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003126480 |
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| Protein GI | 256425827 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.581395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.385444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC ATTTACTGTG TTTGTATTTT CTCTTTTGTA TTATGACAGG GCTTTACGCG
CAACAGCGTG AAGTTACAGG CCGCGTAACA GGAAGTGACG GCGTCCCCAT TCCATATGCT
ACCGTGCAGA TAAAAGGTAC TTCGAAAGGT ACCACCGCAG ACCAGAACGG TAATTTCAAA
TTACTGGTAG ACGGTAATAA TGCGATTCTG CAAATCAGAA GTGTAGGATT TACGCTAAAA
GAAGTGGCAG TCGGCTCAGG TGCTGCACTT GACGTTTCTC TCGCACAGGA CAACCGGAAT
CTGCAGGAAG TAGTTGTAAC CGGTCTGGGT ATCAAACGTG AGAAAAAAGC CCTTGGATAC
GCTGTCCAGG ATGTAAAAGG CGATGACCTG ATCAAAGCCA GCCAGGGCGA TGCACTGCGC
GCTATGTCAG GTAAGGTAGC CGGTATGCAG GTCATCGGCT CTGGTGGTAC GCCAGGCGCC
GCTACCTTTG TAAAATTAAG AGGTACTAAC TCTCTGACTG GTAATAACCA GCCATTGTTT
GTTATTGACG GTATTCCTGT GGATAATTCG CAGAACTATT CCGGCGACCC CGCCGACGCC
GCTAACAATC TGCTGCAAGG TGCTACCAAC ACAAACCGCG GAGCAGATAT CAATCCGGAT
GATATAGAAA GTATCTCCGT GCTGAAAGGC CCGGCTGCTG CAGCTATCTA TGGTATAGAT
GCCGCAAATG GCGCTATTAT TATTACTACT AAAAGGGGAA AAGCTGGTAA AATATCAGTT
GATTTCAGTA CCGGTATTTC CTTTGATAAA GTAAACAGAC TGCCAAAGAT CCAGAAACAG
TTTGTCAAAG GTTCAGGTGG CGTATTGGCG CCTTTCAGTT CTACCAACAG GTATTCCTGG
GGTTCCAATA TAGATACCCT GTTCTGGACC GGTGTGCCTA ATGAATACGA TATTCACGGG
GATGTGGTAG GGGCTTCTAA TCCGAATGCC AAAGTGAAAT TCGTGCCTTA TGATAATACA
GGCGATTTCT GGCGTACAGC CGCTACCTAC AATAATACCT TATCCTTTAC CGGAGGTACA
GACGTTGCGA CTTATCGTAT GTCTGTTTCT CACAACTACC AGAACTCTAT TGTACCGCTG
CAATACAACC AGCGTACAGC AGTTGCTTTA GCGGGTAATC TGAAGATCTC TGAAAAGATC
CGGACATCTG CCAATATCAA CTTCAACGTC TCCAATGGTA GTATGCCACA GAATGGTAGT
AACCTCTCCG GTATCATGCT GGGTCTCACC AGAACGCCTG TTTCATTTGA TAACTCTAAC
GGCGGACTGG ATGCGGATGA TCCGCGTACG TATTTGTTCT CTAACGGTCT GCAGCGTTCT
TACCGTAATG GGATATATGA TAATCCTTTC TGGACCATCA ACAGAAACCC TTATACAACA
GCGGTAAACC GTCTGATAGG TAGTTTACAG TTTGACTGGG ACTTTATCAA AGACTTCACA
CTGACTTACC GTATCGGTAC AGACGTGTAT AGTGATAACC GCCATCAGTA TTATGAAATA
CAATCAGGCG CTTATAACGG TGGTCGTTTA TTTGATGACA GATACACTTA TAAGAGTGTC
AACTCAGATG CGATCATTAC CTGGGCAAGG CAGATCTCCA AAGATTTCAG GATGGATGTA
AAGGTGGGTA ATAACCTTTA TTCCCGCAGA ATGGATGAAC TGTATGTACA GGGTGATGGT
CTGACCTCTC CTGGTTATGA CAACATCAGT AATGCCACTG TACAGAAATC CTACAATTAC
GTCACTCCTT ACAGAAGGAT CTCCGGTTAC TTCGATATCA ACCTGGATCT GAAATCCATG
TTATTCCTGG AAATCACGGG ACGTAATGAC TGGACTTCCA CATTACCACC TAAAAGCAAC
AGTTTCTTCT ATCCATCTGC CAGCCTTGGA TTTGTCTTTA CAGAGCTGGA AGGACTGAAA
GATGGTAAAG TGCTGAGTTT TGGTAAGATC AGGTTATCAG CTGCACAGGT GGGTAAAGAC
CCGGGTGCTT TCCTGACAAA ATCCTTCTCT GTACCTACTA CCTATCCTGA TGGATATACT
ACCGGTGTTT CCTTCCCATA TGACGGAAAA GGTAGTTTCT CGCTGAATAA TGTGCTGGGT
AATCCTAACC TGAAACCTGA GAAGACTGTT TCTTATGAAG CCGGCTTACA GTTACAGTTC
CTGGATAACA GGATCGGACT GGATGCGACA GCCTACCATT CAAAAGGTAC CGATCTGCTG
GTAAGGTCTC CGATGGCCGG TTCTGCAGGT TACCAGTACG TAAACCTGAA CGCGGCTTCT
ATCAGGAATA ATGGTCTGGA AATGACCCTG AGCGCAAAAC CACTGACCGG ACATGCCTTT
ACCTGGGACC TGTTTGTGAA CTACAGTATG AACCGTAGTA AAGTGCTGGC TTTAGCGCCT
GGTATCAATC AGATTACCGT GAATGGATTT ACCGGTACGG TGATCGCACA TCTGCCTGAT
CAGCCGGCGG GTATTATTTA CGCTTATGGA TGGCAGCGTG ATGCACAGGG CCGGATCGTG
ATCAGCGATA ACAGCGGCGA CTTTGGTTAT CCGGTGGTAT CCAATGTACA GACCAGGGTA
GGTAATCCAA ACCCGGTATT CCTGATGGGT ATTGGTAACA CATTCGCTTA TAAGGGATTC
TCCCTGTATT TCCTGGTTGA CTGGAAACAT AAAGGAGATC TCTGGAATGG TACCCGTGGT
TCCCTGCAGG CGATCGGAAC ATCTGCCTAT ACACTGGACA GAGGAAAAAT GCAGGTATTT
CCAGGCGTGA TGGGACACCT GAATGACGCG GGAGAGGTAG TACATAACGA AGGGGGCGCT
GAGAAACCAG GTGGAGGTCC GGTAAATACG ACCTCCGTAC CGCTGGATGA AGACTGGTAC
CTGGGTAATG GTGGCGGATT CGGTGCGCAG ACAGAGACTT TTATTGACGA TGGTTCTTTC
GTAAAACTGC GTGAGATTAC ACTGTCTTAT GACATTCCAG GCAGTATTTT CAAAGATTCC
AGGTTTGTCA AAGGTATTAA TGTGAACGCA TTTGCACGTA ACATCATTAT ATGGACGCCA
TACAAGGGGA TAGATCCTGA AACCAGTTTA ACAGGAGCTA CCAATGCCCA GGGTATTGAT
TATTTCAATA TGCCGGGTAC TGCCAGCTTC GGTCTGAACT TCAAGTTTAA ATTCTAA
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| Protein sequence | MQKHLLCLYF LFCIMTGLYA QQREVTGRVT GSDGVPIPYA TVQIKGTSKG TTADQNGNFK
LLVDGNNAIL QIRSVGFTLK EVAVGSGAAL DVSLAQDNRN LQEVVVTGLG IKREKKALGY
AVQDVKGDDL IKASQGDALR AMSGKVAGMQ VIGSGGTPGA ATFVKLRGTN SLTGNNQPLF
VIDGIPVDNS QNYSGDPADA ANNLLQGATN TNRGADINPD DIESISVLKG PAAAAIYGID
AANGAIIITT KRGKAGKISV DFSTGISFDK VNRLPKIQKQ FVKGSGGVLA PFSSTNRYSW
GSNIDTLFWT GVPNEYDIHG DVVGASNPNA KVKFVPYDNT GDFWRTAATY NNTLSFTGGT
DVATYRMSVS HNYQNSIVPL QYNQRTAVAL AGNLKISEKI RTSANINFNV SNGSMPQNGS
NLSGIMLGLT RTPVSFDNSN GGLDADDPRT YLFSNGLQRS YRNGIYDNPF WTINRNPYTT
AVNRLIGSLQ FDWDFIKDFT LTYRIGTDVY SDNRHQYYEI QSGAYNGGRL FDDRYTYKSV
NSDAIITWAR QISKDFRMDV KVGNNLYSRR MDELYVQGDG LTSPGYDNIS NATVQKSYNY
VTPYRRISGY FDINLDLKSM LFLEITGRND WTSTLPPKSN SFFYPSASLG FVFTELEGLK
DGKVLSFGKI RLSAAQVGKD PGAFLTKSFS VPTTYPDGYT TGVSFPYDGK GSFSLNNVLG
NPNLKPEKTV SYEAGLQLQF LDNRIGLDAT AYHSKGTDLL VRSPMAGSAG YQYVNLNAAS
IRNNGLEMTL SAKPLTGHAF TWDLFVNYSM NRSKVLALAP GINQITVNGF TGTVIAHLPD
QPAGIIYAYG WQRDAQGRIV ISDNSGDFGY PVVSNVQTRV GNPNPVFLMG IGNTFAYKGF
SLYFLVDWKH KGDLWNGTRG SLQAIGTSAY TLDRGKMQVF PGVMGHLNDA GEVVHNEGGA
EKPGGGPVNT TSVPLDEDWY LGNGGGFGAQ TETFIDDGSF VKLREITLSY DIPGSIFKDS
RFVKGINVNA FARNIIIWTP YKGIDPETSL TGATNAQGID YFNMPGTASF GLNFKFKF
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