| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6875 |
|---|
| Symbol | |
|---|
| ID | 8363067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8609474 |
|---|
| End bp | 8610547 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644969008 |
|---|
| Product | Malate/L-lactate dehydrogenase |
|---|
| Protein accession | YP_003126477 |
|---|
| Protein GI | 256425824 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2055] Malate/L-lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.366765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA TAGTCTCTTA TCCCCAATTA CGGGAATTTA CCAGAGCGGT TTTTATAAAA
ATGGGTTGTC CTCCGCAGGA CGCTGAAACT GCCAGCGAGG TATTGTTATC AGCTGACCTC
AGGGGTATTG ATTCTCATGG TGTAGCCCGC CTGAGCGGAT ATGTACGTCT GTGGGAAGCC
GGGAGGATCA ATGCTACACC GAATGTACGT GTGGTATATG AAACACCCAG CACGGCTGTA
GTGGATGGTG ATGCCGGTCT CGGACTGGTC GTAGCGCCAT TTGCGATGAA AGTAGCCATC
GAAAAGGCGG CTGCTGTAGG TAGCGGCTGG GTGAGTGTCA GGAATTCCAA TCACTTCGGT
ATAGCGGGTC AACATGCGAT GATGGCCCTG GAGAAGGATA TGATCGGGAT GGCAATGACA
AATGCCAGTC CGCTGGTAGC ACCGACATTC GCCACTGAGC GTATGCTGGG TACCAATCCG
ATAGCGGTAG CTATTCCGGC GAAAGAGCAA CCGGCATTTG TGGCAGATTT TGCTACGACG
ACGGCTGCTA ACGGCAAACT GGAAATACTC CAGCGCAAAA GCCAGGAAGC GCCTACAGGC
TGGATCCAGG ATAAAGACGG GCATTCCAGT ACTAATCCGC ACGAGCTTAA ATCCGGTGGT
GCATTGTTGC CACTGGGTGG CGATCGTGAC CACGGCAGCC ACAAAGGCTA CTGTCTGGGA
GCGATTGTAG ATATCTTCTC AGCGGTATTG TCAGGCGCCA ATTATGGTCC CTGGGCGCCT
CCTTTTGTCA GCTTCCTGCC ACTGGCGCCG GATCCGGTAG GAGAAGGGCT GGGGCATTTC
CTGGGAGCCA TGAGGGTAGA TGCTTTCCGT CCGGCAGATG AATTCAAGGA GCACATGGAC
AAATGGATCA CCCGTTTCCG CCAGGCGACG CCTGTAGCCG GTGAACAGGT ACTGATACCA
GGAGATCCTG AGCGGGAAAT GGAGAAAGAG CGGAGAGTAT CTGGTATTCC TTTACTGGAT
CCGGTAGTGA AAGATCTGCA GGAAGTAGCG GGAAAATTTA AATTGGATTT TTAA
|
|---|
| Protein sequence | MSQIVSYPQL REFTRAVFIK MGCPPQDAET ASEVLLSADL RGIDSHGVAR LSGYVRLWEA
GRINATPNVR VVYETPSTAV VDGDAGLGLV VAPFAMKVAI EKAAAVGSGW VSVRNSNHFG
IAGQHAMMAL EKDMIGMAMT NASPLVAPTF ATERMLGTNP IAVAIPAKEQ PAFVADFATT
TAANGKLEIL QRKSQEAPTG WIQDKDGHSS TNPHELKSGG ALLPLGGDRD HGSHKGYCLG
AIVDIFSAVL SGANYGPWAP PFVSFLPLAP DPVGEGLGHF LGAMRVDAFR PADEFKEHMD
KWITRFRQAT PVAGEQVLIP GDPEREMEKE RRVSGIPLLD PVVKDLQEVA GKFKLDF
|
|---|
| |