Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6871 |
Symbol | |
ID | 8363063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8602017 |
End bp | 8603231 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644969004 |
Product | DNA-directed DNA polymerase |
Protein accession | YP_003126473 |
Protein GI | 256425820 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0631256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCTT TGCAACACAG GTCCATCGCT CATTTCGACA TGGATAGCTT CTTCGTATCA GTGGAATGCA GGGACGATAA CAGCCTGAAA GGAAAACCAC TGCTTGTCGG CGGTATGAGT GACCGGGGCG TTGTAGCTGC CTGCAGTTAC GAAGCCCGCC GCTATGGGAT TCATTCGGCC ATGCCCATGA AGGTTGCACT TAAATTGTGC CCGCACGCCA TCGTCAGAAG AGGCGACGTG GAAAAATACA GCCAGATCTC CCGTGAAGTA ACCGGACTCA TAGCTGATAA AGCCCCCCTC TACGAGAAAT CATCCATAGA TGAATTCTAT CTCGACCTCA CCGGTATGGA CAAATTCTTC GGTTCTATGA AATGGACCAC CGAACTACGC CAGTATATTA TGCGGGAAAC ACAACTGCCG GTTTCCTTCG GGCTCGCCTC CAACAAAATG ATCTCTAAAG TGGCTACCAA CGAGGCTAAA CCCAATGGTC AGCTGGAAAT ACTCTTTGGC AATGAAAAAT CTTTCCTCGC TCCTATGCCG GTGGAAAAAC TCCCCATGGT GGGTAAGGAA ACAGCCAGCC AGCTGCGCCG TCGCGGAGTA GAAACCGTAA AAACCCTGAG CGAAATACCG CTCTCCCTGC TGGAAGCCTG GCTGGGGAAG AATGGTATCT CCCTCTGGAA CAAAGCCAAT GGTATTGACG AGTCTCCCGT TGTGCCCTAC CATGAACAAA AGTCTATCTC TACCGAAAAC ACCTTCCATA CCGACACCAT CGATATGCAG TTCATACATG CGGAACTCGT GCGTATGACG GAAAAAATCG CCTTCGAACT CAGACAACAG GATAAACTCA CCGGTTGTGT CACCGTCAAA ATCCGCTATT CTGATTTTGA AACCGTAACA AAACAGATGA CCATACCCTA TTCCAGCAGC GATCATGTGC TATTGGAAAA GGTAAAAGAA CTATTTACTA AACTATATGA CAGAAGACTC CTTATCCGTC TGATAGGGGT ACGCTTCAGT CACCTGGTAC ATGGTAACCA TCAGATCAGC CTCTTTGATG ATACACAGGA AATGATCTCC CTTTACCAGG CCATAGACAA TATAAAAAAC CGCTTCGGAT GGCAATACCT GATGCGGGGT ACCAACGCCG CTCCCCAGTC AAAAAAAGGG GACATAAAAC AGCGGGATAT CATGCCGTAT CCAAAAGTGA GATAA
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Protein sequence | MISLQHRSIA HFDMDSFFVS VECRDDNSLK GKPLLVGGMS DRGVVAACSY EARRYGIHSA MPMKVALKLC PHAIVRRGDV EKYSQISREV TGLIADKAPL YEKSSIDEFY LDLTGMDKFF GSMKWTTELR QYIMRETQLP VSFGLASNKM ISKVATNEAK PNGQLEILFG NEKSFLAPMP VEKLPMVGKE TASQLRRRGV ETVKTLSEIP LSLLEAWLGK NGISLWNKAN GIDESPVVPY HEQKSISTEN TFHTDTIDMQ FIHAELVRMT EKIAFELRQQ DKLTGCVTVK IRYSDFETVT KQMTIPYSSS DHVLLEKVKE LFTKLYDRRL LIRLIGVRFS HLVHGNHQIS LFDDTQEMIS LYQAIDNIKN RFGWQYLMRG TNAAPQSKKG DIKQRDIMPY PKVR
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