Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6864 |
Symbol | |
ID | 8363056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8594961 |
End bp | 8597423 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968997 |
Product | DEAD/H associated domain protein |
Protein accession | YP_003126466 |
Protein GI | 256425813 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.141518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA AAGCGCGCGG ATGGCAGGTG ATCATAGAAT GGCTGGCTGC AAGAGACAGA AAGCCCTTTA CATTCCAGGA AGAAGCCTGG AAACATTACA TGCAGGGCAA ATCAGGCCTT GTCAACGCCC CTACCGGTTA CGGTAAAACC TTCTCACTTT TCCTGGGTGT TGTAATCGAC TGGATCAATA AACATCCGGA TGATTACCAA GAGAAAACAA AGAACGGTCT GCAAATGCTG TGGATCACTC CGCTACGTGC ACTGGCAAAA GATATTGCCC GCGCCATGGA GGAAGTACTG CAGGAACTCA ATATGCCCTG GCAGGTAGGC ATCCGCAGTG GAGATACGCC CATATCTACC CGGCAGCAGC AAAAGAAGAT GATGCCGGAG ATCCTGCTTA TTACACCGGA AAGTCTGCAC CTCCTGATGG GGCAAAAAGA ATATCCCAAG GTATTTACAC ACCTGACGAC CGTCGTGGCG GATGAATGGC ATGAATTGCT GGGCAGCAAA CGCGGCGTTA TGGTGGAACT GGGTCTCAGC AGACTCCGTG GACTGGCGAA AAAGGCAGGT CGTCCGCCAC TGAAGGTATG GGGTATATCT GCAACGATTG GCAACCTGGA TGAAGCGCTG GATGTACTGC TCGGTCAGCC GGATCCGGAA GCTGTCATTA TACGCGCCAA ACTGGATAAG AAGATCGAAC TACAGAGCAT CTTACCCGAT GAAATTGAGA AATTCCCTTG GGCAGGTCAC TTAGGCACCA AGCTGCTGTA TAAAGCGCTG CCGGTGATCA TGAACAGCAA AACGACACTT ATATTCACCA ATGTCCGTTC CCAGACGGAG ATCTGGTACC AGGAAATTTT AAGGCAATGC CCCGAACTGG CAGGCGCTAT TGCGATTCAC CATGGTTCCA TTGATATGGA ACTACGTGTG TGGGTGGAAG AAGCGCTGCA TACCGGCGTA CTGAAAGCGG TGGTGTGTAC CTCCAGCCTT GACCTGGGCG TAGACTTCCG TCCGGTAGAT ACCGTTATCC AGGTCGGCAG TCCGAAAGGA GTTGCCCGTT TCCTCCAACG CGCAGGCCGA AGCGGTCACC AGCCAGGAGC TACCAGTAAA ATATGGTTCC TTCCCACCCA CAGTCTTGAA CTGGTAGAAG CCGCAGCACT GAAAGCTGCC ATGGAAGAAC AGCTGGTGGA AAGCCGTATA CCCATCGTGC TTGCTTACGA CGTATTGTTG CAATACCTGA TGACATTAGG CATTTCTGAT GGCTTCCATG CAACTGAAAT ATGGGAGGAA ATTACCAACA CCTTTTGCTT CCGCGATGTA ACAGAAGATG AATGGGCCTG GATGCTGGCA TTTCTAAGCA CCGGCGGAGA TGCACTTTAC AGCTACGATG AATTCAAAAA GCTGGAAAGA GAAGGCGACT TTTTCATCTG TCGCAGCCGT ATGCTGGCGA TGCGCCACCG ACTGCATATC GGTACGATTG TAAGCGACGC CATGCTGAAA GTAAAATTTA TGAGCGGCGG TTTCATCGGC ATGATAGAAG AATGGTTTGT TGCCCGTCTG CAGCCCGGAG ATGCCTTCAG TCTGGGCGGA CGCACACTGG AATTTGCCAT GATCAAAGAC ATGACGGTAC TGGTGCGTAA ATCCAATGCC AAACGTGCCA TTGTACCCAG CTGGATGGGA GGACGTTTAC CCCTTTCTGC CAATCTGGGT AAAATGCTGC GCCGCACTTA TAACGAAGCA TTATCCGGCA AATCAGATAT GCCGGAGATC AAAATATTAC AGCCCTTATT CGACTTACAG GAACGGCTTT CTCACATACC CAAGGACAAT GAACTGCTGA TCGAAATGAT CACTACCCGT GATGGTTATC ACATGTTTGT CTATCCTTTT GAAGGGCGAC TGGTACACGA AGTAATGGCG GCACTGCTGG CTTACCGTAT CAGTAAACGG CAGCCGATCA CTTTCTCCAT GGCCATGAAT GACTATGGTT TTGAATTGCT GTCAGATCAG CCGATTCCGG TAAGTGAAGG AGATGTACAC GATCTTTTCT CTCTGGAAAA TCTGACTATT GATCTACAGG CCAGTGTCAA CTCAACAGAG ATGGCCCGCA GGAAATTCAG GGATATAGCA GTTATCGCAG GACTGATCTT CCAGGGGTAT CCCGGCAAAC ATAAAGCCAG CCGGCACCTG CAATCATCAG CCTCATTACT GTTCAATGTA TTCAAGGATT ATGATCCGCA GAACCTGTTG TTACGACAGG CATTCAATGA AGCCTTTTTC TATCAGATGG AAGAAGCCAG GTTACGGGAA AGCCTGGACC GTATTTACAA CAGCAATATC ATCATTACGG AACCTGAAAG CCTGACACCT TTCTGTTTCC CGATAAAAGT AGATAGTTTA AGGGAAAACC TGACCAGCGA AAAACTGGAG GACAGAATCA AAAAAATGCG TCCGCAGTTT TAG
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Protein sequence | MKNKARGWQV IIEWLAARDR KPFTFQEEAW KHYMQGKSGL VNAPTGYGKT FSLFLGVVID WINKHPDDYQ EKTKNGLQML WITPLRALAK DIARAMEEVL QELNMPWQVG IRSGDTPIST RQQQKKMMPE ILLITPESLH LLMGQKEYPK VFTHLTTVVA DEWHELLGSK RGVMVELGLS RLRGLAKKAG RPPLKVWGIS ATIGNLDEAL DVLLGQPDPE AVIIRAKLDK KIELQSILPD EIEKFPWAGH LGTKLLYKAL PVIMNSKTTL IFTNVRSQTE IWYQEILRQC PELAGAIAIH HGSIDMELRV WVEEALHTGV LKAVVCTSSL DLGVDFRPVD TVIQVGSPKG VARFLQRAGR SGHQPGATSK IWFLPTHSLE LVEAAALKAA MEEQLVESRI PIVLAYDVLL QYLMTLGISD GFHATEIWEE ITNTFCFRDV TEDEWAWMLA FLSTGGDALY SYDEFKKLER EGDFFICRSR MLAMRHRLHI GTIVSDAMLK VKFMSGGFIG MIEEWFVARL QPGDAFSLGG RTLEFAMIKD MTVLVRKSNA KRAIVPSWMG GRLPLSANLG KMLRRTYNEA LSGKSDMPEI KILQPLFDLQ ERLSHIPKDN ELLIEMITTR DGYHMFVYPF EGRLVHEVMA ALLAYRISKR QPITFSMAMN DYGFELLSDQ PIPVSEGDVH DLFSLENLTI DLQASVNSTE MARRKFRDIA VIAGLIFQGY PGKHKASRHL QSSASLLFNV FKDYDPQNLL LRQAFNEAFF YQMEEARLRE SLDRIYNSNI IITEPESLTP FCFPIKVDSL RENLTSEKLE DRIKKMRPQF
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