Gene Cpin_6851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6851 
Symbol 
ID8363043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8582181 
End bp8583101 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID644968984 
Producthypothetical protein 
Protein accessionYP_003126453 
Protein GI256425800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.258194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.934033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAC GACCTAAGAT CCTGGTTGTA TATTATACGC AAACAGGACA ATTAAAGCGA 
ATCGTCGATA CGGTATTAGG CCCTTTACAG GATAAAGCAA CCATCGTATA CGAAGAATTG
AAACCAGTGA AACCATTCGA GTTCCCGTGG AAGAAGCAGG TTTTTTATGA TACGATGCCG
GAAACGGTAT TAGGTAAACC CAGTGCCATT GCTCCGCTGA AAGTGAACCC GGATGAGCAT
TTTGACCTTG TTATCCTGGC TTATCAACCC TGGTTCCTTT CTCCTTCACA GCCTACGGCA
GCATTTTTGC AGAGTGAATC AGCAGCACGT TTGCTGAAAG GTAAACCTGT AATCACGCTG
ATGGGATGTC GTAATATGTG GCTGAATGCA CAGGAGAGCG TAAAGCAATA CCTGCATAAG
GCAGGTGCAC ACCTGGTAGG CAACATTGTA TTGGTGGATA AATCGCCTAA CCTGGTCGCC
CTGATCACGG TATTAAGATG GCAGTTCAAA GGAAAGAAAG AAGCAACCTC CCTGTTACCG
CCCGCAGGTG TACAGGAAGC TGATATTATT GCATCCGCGC GTTTTGCAGA ACCGATCGCT
AAAGTGCTGG AAGACAGACA GTGGGACGCA TTGCAACCCC GCCTGCTGGA ACAGGGAGCG
GTAGACTTAC TGCCTAACCT GATCCTGCTG GAAGACAGGG GTATCAGGGC ATTCCGCTAC
TGGTCAAAGT TTATCAGTGC GAAAGGTGGT CCGGGCGCTC CTGAGCGTCA GGGCAGGGTG
TCCATGTACA GAGGATTATT ATTGATCGGC ATATTCGTAT TATCACCTAT CGCCAAGATA
ACATCCATAT TCAAGCTCGC GTTAAATAAG GGTAAGCTCC AGGAAGATGT AAAGTACTAT
AAAGGCATAC ATCTGCGCTA A
 
Protein sequence
MIERPKILVV YYTQTGQLKR IVDTVLGPLQ DKATIVYEEL KPVKPFEFPW KKQVFYDTMP 
ETVLGKPSAI APLKVNPDEH FDLVILAYQP WFLSPSQPTA AFLQSESAAR LLKGKPVITL
MGCRNMWLNA QESVKQYLHK AGAHLVGNIV LVDKSPNLVA LITVLRWQFK GKKEATSLLP
PAGVQEADII ASARFAEPIA KVLEDRQWDA LQPRLLEQGA VDLLPNLILL EDRGIRAFRY
WSKFISAKGG PGAPERQGRV SMYRGLLLIG IFVLSPIAKI TSIFKLALNK GKLQEDVKYY
KGIHLR