Gene Cpin_6847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6847 
Symbol 
ID8363039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8578336 
End bp8579073 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content49% 
IMG OID644968980 
ProductABC transporter related 
Protein accessionYP_003126449 
Protein GI256425796 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGC AGGATCTGCA CAAAACATAT AAAGGAGCGC TGGAACCATC TCTGAAAGGC 
CTTTCATTCA GCTTCCCCGA AGGAAGCATC GTCGGCTTGC TTGGACCCAA CGGAGCGGGA
AAGACGACTA CGATATCCAT CCTGTGCGGA TTGGTAAAAG CAGATGCAGG TCAGGTAAAG
ATATTTGATC AACAGCAAAA TACTGCCAAC CGCGAAACGA TCAAAAAACT GATAGGCGTC
GTGCCACAGC AGATCGCATT ATTTCCACAC CTTACAGCGA TTGAAAATCT GGTGTATTTC
GGTAACCTGT ACGGACTGAA AGGCAAGCCC CTGCGCAGCC TTATTGATCA GTACCTGCAG
GCGTTCGGAC TGGAAAAAGC GGCTCATAAA CAGGTACATC ATTATTCAGG AGGGATGAAA
CGCCGTACCA ATATCATCGC GGCGATCTTA CACCAGCCTC GTTTACTGAT ACTGGATGAA
CCGACTGCCG GTGTGGATGT ACAATCGCGC ACTATGATCC TGCAGTTCCT GCGTGAGTAC
AATCAGCAGG GCGTAAGTAT TGTGTATACT TCACATCTGC TGGATGAAGC GCAGACGATC
TGTAGTGAGG TGGTGATCAT CGATGAAGGA AAAGCAGTGG TACAGGGCGG TACGGAAGAA
CTGATTGCAA GGCATGACGA TTGCCGTAAC CTGGAAGACG TGTTCCTGCA TTATACAGGA
CATGCATTAA GAGACTAA
 
Protein sequence
MLVQDLHKTY KGALEPSLKG LSFSFPEGSI VGLLGPNGAG KTTTISILCG LVKADAGQVK 
IFDQQQNTAN RETIKKLIGV VPQQIALFPH LTAIENLVYF GNLYGLKGKP LRSLIDQYLQ
AFGLEKAAHK QVHHYSGGMK RRTNIIAAIL HQPRLLILDE PTAGVDVQSR TMILQFLREY
NQQGVSIVYT SHLLDEAQTI CSEVVIIDEG KAVVQGGTEE LIARHDDCRN LEDVFLHYTG
HALRD