Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6847 |
Symbol | |
ID | 8363039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8578336 |
End bp | 8579073 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968980 |
Product | ABC transporter related |
Protein accession | YP_003126449 |
Protein GI | 256425796 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTGC AGGATCTGCA CAAAACATAT AAAGGAGCGC TGGAACCATC TCTGAAAGGC CTTTCATTCA GCTTCCCCGA AGGAAGCATC GTCGGCTTGC TTGGACCCAA CGGAGCGGGA AAGACGACTA CGATATCCAT CCTGTGCGGA TTGGTAAAAG CAGATGCAGG TCAGGTAAAG ATATTTGATC AACAGCAAAA TACTGCCAAC CGCGAAACGA TCAAAAAACT GATAGGCGTC GTGCCACAGC AGATCGCATT ATTTCCACAC CTTACAGCGA TTGAAAATCT GGTGTATTTC GGTAACCTGT ACGGACTGAA AGGCAAGCCC CTGCGCAGCC TTATTGATCA GTACCTGCAG GCGTTCGGAC TGGAAAAAGC GGCTCATAAA CAGGTACATC ATTATTCAGG AGGGATGAAA CGCCGTACCA ATATCATCGC GGCGATCTTA CACCAGCCTC GTTTACTGAT ACTGGATGAA CCGACTGCCG GTGTGGATGT ACAATCGCGC ACTATGATCC TGCAGTTCCT GCGTGAGTAC AATCAGCAGG GCGTAAGTAT TGTGTATACT TCACATCTGC TGGATGAAGC GCAGACGATC TGTAGTGAGG TGGTGATCAT CGATGAAGGA AAAGCAGTGG TACAGGGCGG TACGGAAGAA CTGATTGCAA GGCATGACGA TTGCCGTAAC CTGGAAGACG TGTTCCTGCA TTATACAGGA CATGCATTAA GAGACTAA
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Protein sequence | MLVQDLHKTY KGALEPSLKG LSFSFPEGSI VGLLGPNGAG KTTTISILCG LVKADAGQVK IFDQQQNTAN RETIKKLIGV VPQQIALFPH LTAIENLVYF GNLYGLKGKP LRSLIDQYLQ AFGLEKAAHK QVHHYSGGMK RRTNIIAAIL HQPRLLILDE PTAGVDVQSR TMILQFLREY NQQGVSIVYT SHLLDEAQTI CSEVVIIDEG KAVVQGGTEE LIARHDDCRN LEDVFLHYTG HALRD
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