Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6842 |
Symbol | |
ID | 8363034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8572497 |
End bp | 8574230 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968975 |
Product | peptidase M14 carboxypeptidase A |
Protein accession | YP_003126444 |
Protein GI | 256425791 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.922108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.679276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TCTTCCATAT CGCCGTAATC ATCTGTTGCT GCTACTCCGC TGCCGCACAG CACATGACCA CCCGTTTTGA AAAAACACGG GGACAGGAAA CGGCCACCTA TGCAGAATGT ATCGCCTACT ATCAACAGCT CGATAAACGT TTTCCACAGA TCCTGGTGAA GGAAATGGGA AATACAGATG CCGGTCTGCC ATTACACCTG GTCATCTACT CTCCTTCCAA AGATTTCAAT TTTACCAGCC TTCGTCAGAA AAACAAGCGT ATTATACTGG TTAACAATGG TATTCACTCC GGCGAACCAG ACGGTATTGA CGCATCCATG ATGTTGCTGC GCGACCTGGC GCTTGGTAAA AAGAAACTGC CGGACAACAT CGTGCTGGCG GTTATCCCCG TGTATAACAT CGGCGGCGCC CTGAACCGCA GCACCGATTA CCGGGTGGAC CAGAATGGTC CCGCTGCTTT CGGCTCCCGT GGGAATGCCC GTAACTATGA CCTGAACCGC GACTTTATAA AAGCCGACTC CCGCAACGCC CGCTCTTTCC AGCAGATCTA TCAGCTGACG GATCCGGACG TCTTTATTGA CAACCACGTC AGCAACGGAG CCGACTACCA GCATATTATG ACGCTCTTAT CCACAGAGCA TAATAAAATG GGCGGCGCCA TGGGCAATTT CCTGCACAAG GAATTTGAAC CCGGCATCTA CCGGCTCATG AAAGAAAAAG GATATGACCT GGTTCCCTAC GTCAACCACT TTGGTGAGAC ACCGGAAAAC GGATGGATCA CGTATGCGGA TGGTCCGCGT TATTCCAGCG GCTACACCAC CCTTTTCCAC ACCTTCGGTT TCGTGCCCGA AACACATATG CTGAAACCTT ATCCGCAAAG GGTACAGGCT ACCTACGCCC TGATGGAATC GTTCATCAGC TTCGTCAGCC AGCACAGCGA AGAAATCAAA ACCCTGCGCG CACAAACAAA AGAGCAGGAA AAAACACAGG AACGTTTTCC CCTGGAGTGG AATGTGGATA CCACACACTA CAGCATGATC AACTTCAAAG GATATGCAGC CATACACAAA CCCAGCGAAA TCTCCGGAGA ACCCCGCCTG TTTTACGATC GTAGCAAGCC TTTTGAAAAA CAGGTAAAGT TCTATGACAA CGTAGTAGCG GGTAACTTCG TGCAGAAACC AACCGCCTAT ATCATCCCGC AAGGCTGGTG GAACGTAGTG GATCTCCTGA AAAATAACGC CGTACTAATG CGACGTCTTT CACAGGATAC CACCCTCCTG GTAGAAACGT ATCATATCGC CGACTACAAA ACAGCACAAC GTCCTTATGA AGGTCATTAC CTGCATAACA GCGTAAAGCT GACTGTTACG CAGGACAGTA TCCACTTCCG CAAAGGAGAT TATTACATCC CGATGAACCA GGTAGCCAAC CGTTACCTGA TGGAGACACT GGAACCAACT GGTGGCGATT CTTTCTTTGC ATGGAACTTC TTCGATCCGA TCCTGGCACG TAAAGAAGGC TATTCGCCTT ATGTGTTTGA AGATATCGCA GCAGCCTATC TGCAATCCAA TCCTGCATTA CAGGAAGAGA TGAAACAAAA AAGAGCGGCA GACAGCACTT TCGCTAAAAG CGGAGAAGCA CAATTGAGAT ATGTATATGA ACATTCTCCG TATGCAGAAC CAGGATATAT GAGATACCCG GTGTTTAGAA TAATTAGGAA TTAG
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Protein sequence | MKKLFHIAVI ICCCYSAAAQ HMTTRFEKTR GQETATYAEC IAYYQQLDKR FPQILVKEMG NTDAGLPLHL VIYSPSKDFN FTSLRQKNKR IILVNNGIHS GEPDGIDASM MLLRDLALGK KKLPDNIVLA VIPVYNIGGA LNRSTDYRVD QNGPAAFGSR GNARNYDLNR DFIKADSRNA RSFQQIYQLT DPDVFIDNHV SNGADYQHIM TLLSTEHNKM GGAMGNFLHK EFEPGIYRLM KEKGYDLVPY VNHFGETPEN GWITYADGPR YSSGYTTLFH TFGFVPETHM LKPYPQRVQA TYALMESFIS FVSQHSEEIK TLRAQTKEQE KTQERFPLEW NVDTTHYSMI NFKGYAAIHK PSEISGEPRL FYDRSKPFEK QVKFYDNVVA GNFVQKPTAY IIPQGWWNVV DLLKNNAVLM RRLSQDTTLL VETYHIADYK TAQRPYEGHY LHNSVKLTVT QDSIHFRKGD YYIPMNQVAN RYLMETLEPT GGDSFFAWNF FDPILARKEG YSPYVFEDIA AAYLQSNPAL QEEMKQKRAA DSTFAKSGEA QLRYVYEHSP YAEPGYMRYP VFRIIRN
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