Gene Cpin_6842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6842 
Symbol 
ID8363034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8572497 
End bp8574230 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content49% 
IMG OID644968975 
Productpeptidase M14 carboxypeptidase A 
Protein accessionYP_003126444 
Protein GI256425791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.922108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.679276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TCTTCCATAT CGCCGTAATC ATCTGTTGCT GCTACTCCGC TGCCGCACAG 
CACATGACCA CCCGTTTTGA AAAAACACGG GGACAGGAAA CGGCCACCTA TGCAGAATGT
ATCGCCTACT ATCAACAGCT CGATAAACGT TTTCCACAGA TCCTGGTGAA GGAAATGGGA
AATACAGATG CCGGTCTGCC ATTACACCTG GTCATCTACT CTCCTTCCAA AGATTTCAAT
TTTACCAGCC TTCGTCAGAA AAACAAGCGT ATTATACTGG TTAACAATGG TATTCACTCC
GGCGAACCAG ACGGTATTGA CGCATCCATG ATGTTGCTGC GCGACCTGGC GCTTGGTAAA
AAGAAACTGC CGGACAACAT CGTGCTGGCG GTTATCCCCG TGTATAACAT CGGCGGCGCC
CTGAACCGCA GCACCGATTA CCGGGTGGAC CAGAATGGTC CCGCTGCTTT CGGCTCCCGT
GGGAATGCCC GTAACTATGA CCTGAACCGC GACTTTATAA AAGCCGACTC CCGCAACGCC
CGCTCTTTCC AGCAGATCTA TCAGCTGACG GATCCGGACG TCTTTATTGA CAACCACGTC
AGCAACGGAG CCGACTACCA GCATATTATG ACGCTCTTAT CCACAGAGCA TAATAAAATG
GGCGGCGCCA TGGGCAATTT CCTGCACAAG GAATTTGAAC CCGGCATCTA CCGGCTCATG
AAAGAAAAAG GATATGACCT GGTTCCCTAC GTCAACCACT TTGGTGAGAC ACCGGAAAAC
GGATGGATCA CGTATGCGGA TGGTCCGCGT TATTCCAGCG GCTACACCAC CCTTTTCCAC
ACCTTCGGTT TCGTGCCCGA AACACATATG CTGAAACCTT ATCCGCAAAG GGTACAGGCT
ACCTACGCCC TGATGGAATC GTTCATCAGC TTCGTCAGCC AGCACAGCGA AGAAATCAAA
ACCCTGCGCG CACAAACAAA AGAGCAGGAA AAAACACAGG AACGTTTTCC CCTGGAGTGG
AATGTGGATA CCACACACTA CAGCATGATC AACTTCAAAG GATATGCAGC CATACACAAA
CCCAGCGAAA TCTCCGGAGA ACCCCGCCTG TTTTACGATC GTAGCAAGCC TTTTGAAAAA
CAGGTAAAGT TCTATGACAA CGTAGTAGCG GGTAACTTCG TGCAGAAACC AACCGCCTAT
ATCATCCCGC AAGGCTGGTG GAACGTAGTG GATCTCCTGA AAAATAACGC CGTACTAATG
CGACGTCTTT CACAGGATAC CACCCTCCTG GTAGAAACGT ATCATATCGC CGACTACAAA
ACAGCACAAC GTCCTTATGA AGGTCATTAC CTGCATAACA GCGTAAAGCT GACTGTTACG
CAGGACAGTA TCCACTTCCG CAAAGGAGAT TATTACATCC CGATGAACCA GGTAGCCAAC
CGTTACCTGA TGGAGACACT GGAACCAACT GGTGGCGATT CTTTCTTTGC ATGGAACTTC
TTCGATCCGA TCCTGGCACG TAAAGAAGGC TATTCGCCTT ATGTGTTTGA AGATATCGCA
GCAGCCTATC TGCAATCCAA TCCTGCATTA CAGGAAGAGA TGAAACAAAA AAGAGCGGCA
GACAGCACTT TCGCTAAAAG CGGAGAAGCA CAATTGAGAT ATGTATATGA ACATTCTCCG
TATGCAGAAC CAGGATATAT GAGATACCCG GTGTTTAGAA TAATTAGGAA TTAG
 
Protein sequence
MKKLFHIAVI ICCCYSAAAQ HMTTRFEKTR GQETATYAEC IAYYQQLDKR FPQILVKEMG 
NTDAGLPLHL VIYSPSKDFN FTSLRQKNKR IILVNNGIHS GEPDGIDASM MLLRDLALGK
KKLPDNIVLA VIPVYNIGGA LNRSTDYRVD QNGPAAFGSR GNARNYDLNR DFIKADSRNA
RSFQQIYQLT DPDVFIDNHV SNGADYQHIM TLLSTEHNKM GGAMGNFLHK EFEPGIYRLM
KEKGYDLVPY VNHFGETPEN GWITYADGPR YSSGYTTLFH TFGFVPETHM LKPYPQRVQA
TYALMESFIS FVSQHSEEIK TLRAQTKEQE KTQERFPLEW NVDTTHYSMI NFKGYAAIHK
PSEISGEPRL FYDRSKPFEK QVKFYDNVVA GNFVQKPTAY IIPQGWWNVV DLLKNNAVLM
RRLSQDTTLL VETYHIADYK TAQRPYEGHY LHNSVKLTVT QDSIHFRKGD YYIPMNQVAN
RYLMETLEPT GGDSFFAWNF FDPILARKEG YSPYVFEDIA AAYLQSNPAL QEEMKQKRAA
DSTFAKSGEA QLRYVYEHSP YAEPGYMRYP VFRIIRN