| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6834 |
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| Symbol | mnmA |
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| ID | 8363026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8561465 |
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| End bp | 8562565 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968967 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_003126436 |
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| Protein GI | 256425783 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.560399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAC ATGGTAAAGT TCTGGTAGCA ATGAGCGGCG GTATAGATAG TACCGTTACC
GCCCTGATGC TGCATGAACA AGGGTATGAA GTGGTGGGTA TCACCATGAA AACCTGGGAC
TACGCATCTG CCGGCTCCAG CAAGAAAGAA ACCGGGTGCT GTAACCTGGA TTCCTTTAAT
GATGCCCGTG CAGCCGCCGT ACACCACGGT TTTCCGCACT TCGTACTCGA TATCAGAGAC
GAGTTCGGGG ATTTTGTTAT TAATAACTTT GTTGACGAAT ACATAGCAGG CCGCACACCA
AATCCTTGCG TTCTGTGCAA TACCCATATT AAATGGCGTG CGCTGATGAA GCGTGCCGAC
GCCATGGACT GTGCCTTTAT TGCAACAGGA CACTACGCTC AGATCAGAGA GCAGGATGGC
CGCCACATAC TCAGCAAAGG TATTGATGAC CTGAAAGATC AGAGCTACGT ATTATGGGGC
TTACAGCAGG ACGTGCTGGC CCGTACAATA CTTCCTTTAG GACAATACCG TAAAACCGAG
ATCCGCCAGA TGGCCTTCGA CTTCGGTTAT CCGGAACTGG CGAAAAAAGC AGAGAGCTAT
GAGATCTGCT TTGTGCCTGA CAATGACTAC CGCGGATTCC TGAAACGCAA AGTAGATGGT
TTAGAAGAAC AGGTGAACGG TGGTAACTTC GTACTCAGAG ACGGTACGAT CGTTGGTCAT
CATAAAGGTT ATCCTTTCTA TACCATCGGT CAGCGTAAAG GTCTGGACAT CGCATTAGGT
CGACCGGTGT TTGTTACAGA AATCATCCCG GAAACGAATA CCGTTGTATT GGGGAATGAA
GATGAACTGA ACAGAAATGA AATGACTGTT GCGGGTCTGA ACATGATCAA ATACGATCAT
ATTCCTGAAG GAATGGAAGC GATCACGAAG ATCCGTTATA AAGATAAAGG TGCGTTAAGC
AACCTGTATA ACGTTGATGG TAAGGTGAAG GTGAACTTCT ATGAACATGT GAAGGGAATT
GCACCCGGAC AGTCTGCCGT TTTCTATGAA GGCGATGATG TGATTGCAGG TGGTATTATA
CAGAGAGCTG TGACGCTGTA A
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| Protein sequence | MSRHGKVLVA MSGGIDSTVT ALMLHEQGYE VVGITMKTWD YASAGSSKKE TGCCNLDSFN
DARAAAVHHG FPHFVLDIRD EFGDFVINNF VDEYIAGRTP NPCVLCNTHI KWRALMKRAD
AMDCAFIATG HYAQIREQDG RHILSKGIDD LKDQSYVLWG LQQDVLARTI LPLGQYRKTE
IRQMAFDFGY PELAKKAESY EICFVPDNDY RGFLKRKVDG LEEQVNGGNF VLRDGTIVGH
HKGYPFYTIG QRKGLDIALG RPVFVTEIIP ETNTVVLGNE DELNRNEMTV AGLNMIKYDH
IPEGMEAITK IRYKDKGALS NLYNVDGKVK VNFYEHVKGI APGQSAVFYE GDDVIAGGII
QRAVTL
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