Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6833 |
Symbol | |
ID | 8363025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8559780 |
End bp | 8561285 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968966 |
Product | altronate oxidoreductase |
Protein accession | YP_003126435 |
Protein GI | 256425782 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.634732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACCTA TTTTAAATAA GGCTCATGTA TTGAAGCATC CTGAGTTGGG GGTGTCAGCG GGCTATTTCG ACTATCCGGA GAGAATTTTA CAGTTCGGGA CCGGTGTTTT GCTGAGGGGC CTGGTGGATT ACCTGGTGGA TAAAGCCAAT AAACAGGGTC TTTATCAGGG GCGGATCGTG GTCGTGAAGT CCACCGGAGG CGATACAACT GAGTTTAGCA AACAGGATAA CCTGTTCACA ACCAATATAA AAGGCGTCTC ACAGGGAGAA CTGGTGAATC AGGTACTGAT CAATGCTTCT ATTAGCCGGG TTCTGCAATC GAATGCAGAT TGGGAATTTG TATTACAGGC TGTCCGGCAA CCAGCCCTGC AGACAATCAT ATCGAATACA ACAGAGGTAG GTATACAATA CGTTGAGGAG AAAATAGACG GCGTACCGTC CTCATTCCCC GGAAAACTGC TGGCAGTACT CTGGGAGCGT TTCCAGTACT TTAAGGGCGC CTCTCACACC GGTTTTGTCA TCGTACCGAC AGAGCTGGTG GTGAATAATG GTCAGCTGCT AAAGGAAATC GTGCTGAAAC TGGCGGCTTA TAACCGTTTG CCGGCTACTT TCCTGCAATG GATAGAAGAG GATAACCATT TTTGTAGTTC CCTGGTGGAC AGGATCGTTC CGGGTAAACC GAAGGAACTG GCAGTATTGG AAGAGAAGGC GGGTTATACA GATGGATTGT GGATAGATAC GGAGCCTTAC CTGTTATGGG CGATAGAAGG GGATGACAGG GTGAAAGACA TCCTGGGCTT CCATCAGACG GACAGCAGGA TGCTGATTGC CAGAGATATC ACACCGTTCC GTGAACAGAA GCTGCGTATC CTGAACGGGA GTCATACGAT ATCTGTGCCG CTGGGATACC TGAGCGGATT GAACATCGTA CTGGAATGTA TGGAAGACGC TAATATGCGC GCCTTTTTCC GTACCGTTAT ACTGGAAGAG ATCTTACCGA CGATAAAGGA TATTTGTCCG CAGGCGCCTG CATTCGCAGA AGACGTACTG GATCGTTTTG CTAATCCGAA TATTGCACAT AAACTGCTGA GCATTACTTT CCAGGAAAGT ATGAAGATGA ATGCCAGGAA TGTGAAGACG ATCGTGCGTT ATTACGAAAA GTTCCAGGCA TTGCCGGCCA GTATGTGTCT GGGGTTTGCG GCGATGCTGC TGTTCCTGCG TCCGGAAAAG CTGGATAACG GACAATACTC CGGACAGCGG GGAGAAGAAT ACTATACCAT TACAGACGAT AATATCGCCA TCTTTGCGGA GTACTGGTCA CAGGTAACCG GCAGAGGGGG AGACGCTATC GCGGAGATGG TACAGGCCAT CAGTGCAGAT CAGCGTTTGT GGGAAGCTGA CCTGTCGCAG ATACCAGGGT TTGCAGATAC CGTCACTGCG CATCTGCAAG GCATGTTGCA GGAGGGGGTA AAGTCATATG CAGACAGCTA CAGTAAAGTA TTATAA
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Protein sequence | MLPILNKAHV LKHPELGVSA GYFDYPERIL QFGTGVLLRG LVDYLVDKAN KQGLYQGRIV VVKSTGGDTT EFSKQDNLFT TNIKGVSQGE LVNQVLINAS ISRVLQSNAD WEFVLQAVRQ PALQTIISNT TEVGIQYVEE KIDGVPSSFP GKLLAVLWER FQYFKGASHT GFVIVPTELV VNNGQLLKEI VLKLAAYNRL PATFLQWIEE DNHFCSSLVD RIVPGKPKEL AVLEEKAGYT DGLWIDTEPY LLWAIEGDDR VKDILGFHQT DSRMLIARDI TPFREQKLRI LNGSHTISVP LGYLSGLNIV LECMEDANMR AFFRTVILEE ILPTIKDICP QAPAFAEDVL DRFANPNIAH KLLSITFQES MKMNARNVKT IVRYYEKFQA LPASMCLGFA AMLLFLRPEK LDNGQYSGQR GEEYYTITDD NIAIFAEYWS QVTGRGGDAI AEMVQAISAD QRLWEADLSQ IPGFADTVTA HLQGMLQEGV KSYADSYSKV L
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