Gene Cpin_6830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6830 
Symbol 
ID8363022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8556694 
End bp8557356 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content48% 
IMG OID644968963 
ProductKDPG and KHG aldolase 
Protein accessionYP_003126432 
Protein GI256425779 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTAC CAGCAGCAGA GATCATTGCA GCATTTGAGC GTAGTAAAGC AATCCCGGTA 
TTTTATCATG ATGATGCCGC CGTATGTATA CAGGTATTAC AGGCCTGCTA CGATGCGGGT
ATCCGTGTGT TTGAGTTTAC CAATCGTGGT GAAAATGCGA AGCGTAATTT TACCGCGATG
CGCGAACATA AAATACTGAC CATGCCTGAT ATGTACCTGG GTATTGGTAC GATCAAAGTA
GCGGAAGATG TAAAGGCGTT TGCGCGTCAG GGAGCGGATT TTATTGTAAG TCCGATCATT
GATGCCGGTG TGGCGGAAAG TTGCCGGGAA GAGGATATTG TGTGGATACC CGGTTGTATG
ACACCTTCAG AAATTGCTAT TGCAGAGAAA TATGAAGCAC CGTTAACCAA ACTGTTCCCC
GGAAACGTAT TAGGACCTGG TTTTGTGAAA GCGATCAAGC CTTTGTTTCC GAAGATGAAG
TTTATGCCGA CTGGTGGGGT AGAACCTACT AAAGAGAGTA TCAAATCCTG GCTGGATGCA
GGCGTGGTAT GTGTGGGGAT GGGCTCCAAC CTGCTGAATA AAGAGCTGAT CGATAAGAAG
GACTGGGCGG CGCTGAAAGT ACAGTTAACA GCGCTGGTGA AACTGATCCG GGAAGTAGCC
TGA
 
Protein sequence
MAVPAAEIIA AFERSKAIPV FYHDDAAVCI QVLQACYDAG IRVFEFTNRG ENAKRNFTAM 
REHKILTMPD MYLGIGTIKV AEDVKAFARQ GADFIVSPII DAGVAESCRE EDIVWIPGCM
TPSEIAIAEK YEAPLTKLFP GNVLGPGFVK AIKPLFPKMK FMPTGGVEPT KESIKSWLDA
GVVCVGMGSN LLNKELIDKK DWAALKVQLT ALVKLIREVA