Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6827 |
Symbol | |
ID | 8363019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8552185 |
End bp | 8553021 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968960 |
Product | 5-keto-4-deoxyuronate isomerase |
Protein accession | YP_003126429 |
Protein GI | 256425776 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3717] 5-keto 4-deoxyuronate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCAG AAACCAGGTA CGCCTCTAGT CCGGCGGAGG TAATGAGCTG GAATACAGCC CAGACCAGAA AGGAACTTTT GATTGAACAG CTGTTCGTAC AGGATGAGAT TAAACTGGTA TACAGTCACT ATGACCGCTT TGTTACAGGT GGTATTTTCC CGGTTACGAA ACCATTGCAA CTGACTGCTC CTGATCAGTT CAAGGCGGCT TATTTCCTGG AAAGGAGAGA GCTGGGGATC ATCAATGTGG GTGGTGCCGG AGTGGTAACA GTGGATGGTG AAACCTTTGA AATCGGCTTT AAAGAAGCGC TGTATGTGGG TAAAGGGAAG AAGGAAGTGT CTTTCAGCAG TAAAGACAGT GCCGCGCCGG CGAAGTTCTA CCTGAATTCA ACACCTGCAC ATCATGAATA TCCGAGTCGC CATGTGACCC GTAAAGATGC GGAAGTAGTG ACACTTGGTG CGATGGAAAC ATCTAATCAC CGTACTATCA ATAAGCTGCT TGTCAGCACA GTATTGCCTA CCTGCCAGTT GCAGATGGGG ATGACTGAAC TCAAACCTGG CAGTGTATGG AACACCATGC CTGCACATAC GCATGACAGA CGTATGGAAG TCTATTTCTA TTTCGAAGTG CCACAGGGGC AATCTGTCTG CCATTTCTGG GGCCAGCCGC AGGAAACCCG GCATATCTGG ATGCAGAATG AGCAGGCGGT TATTTCTCCG CCCTGGTCTG TTCACTCCGG CGCTGGTACC AGCAACTATA CTTTCATCTG GGGGATGGCG GGCGAGAACC TGGATTATGG GGATATGGAT GTATGTGCAA TACCTGATCT CAAATAG
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Protein sequence | MTAETRYASS PAEVMSWNTA QTRKELLIEQ LFVQDEIKLV YSHYDRFVTG GIFPVTKPLQ LTAPDQFKAA YFLERRELGI INVGGAGVVT VDGETFEIGF KEALYVGKGK KEVSFSSKDS AAPAKFYLNS TPAHHEYPSR HVTRKDAEVV TLGAMETSNH RTINKLLVST VLPTCQLQMG MTELKPGSVW NTMPAHTHDR RMEVYFYFEV PQGQSVCHFW GQPQETRHIW MQNEQAVISP PWSVHSGAGT SNYTFIWGMA GENLDYGDMD VCAIPDLK
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