Gene Cpin_6826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6826 
Symbol 
ID8363018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8551039 
End bp8552178 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content49% 
IMG OID644968959 
Producthypothetical protein 
Protein accessionYP_003126428 
Protein GI256425775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGA TATTATTACT GTTAATGGCA GCAGGTGGAT GGCATTCCGT GCTGCTGGCT 
AATTCTACGG GTAATGGTAA AGCAGCTCCG GTAAGCATTA CCATCAAAAA TACTTCTGCG
ATCTCCCGTA TGGAGGAGAT CGTTGAAATA CCTTATACAA ATCTTGGCCG TCTGACGGGC
GCCTTTAAAC TGGTGAATAA ACAAACCGGA AAGGAAGTGC CTTACCAGAT CGCTTATGAG
GGTTCTCCTC AGCCACAGTT GCTGCTGGTA CAGGTAAGCG TACCTGCGCA TAAAAGTGTT
ATTATATCGG CGGTTGCTGG TCAGCCGGCA GTTGTAAAAC CACGTACTTA CGCACGTTAT
GTACCTGAGC GCAAGGATGA TTTTGCCTGG GAGAACGACT GCATTGCATT CCGTATGTAT
GGCGCCGCCC TGGAGAATTT CCCGGCAGAA AATGCGCATG GTATAGACGT CTGGACGAAA
CGTACGCCTG ATCTGGTATT GAACAGGTGG TACAAGACGA ACGACTATCA CCATGACAAC
GGTCAGGGAC TGGATTACTA TCATGTAGGT ATGACCCTGG GAGGCGGTGA TATAGCACCT
TATCTGCATG ACTCCCTCTA TTTCCCCAAA AATTACAGGA CGTGGAAAGT GCTGGATAGC
GGTCCGTTAC GTTGTACTTT CCAGTTGGGA TATGAACCCT GGCAGGTAGA CGGCAAAACG
GTTGCCGTAG TCAAAACGAT CTCCCTGGAT GCCGGTGCAC AATTGAATAA AATGAGCGTG
TTGTATACGT TGCAGCAGGG GGATAGTCTA TCGGTAGCAG CAGGTATTGT AAAACGTGCT
GATCCCGGCA CCTTATTGCT GGACGAAAAG ACAGGTGTCC TGGGATACTG GGAACCTGAA
CATGGCGCTG ATGGTATTAC AGGTCTTGGA CTGGTTGTAC CAGTGCAGAA GGGACATATG
AAGGTGACAG ATCAGCATTT GCTGGCAACA GCAAAGGCGA GTGGGAAAGC TTCGTTTGTG
TATTATTTCG GCGCTGCATG GAATAAGGCA GGGTATTATA CCAGTGCGGC AGCATGGTTT
GCTTATCTGC AGACATTTGC CGCCAAACAG GCTTCTCCAC TGGAAATTAA CATCAACTAG
 
Protein sequence
MKRILLLLMA AGGWHSVLLA NSTGNGKAAP VSITIKNTSA ISRMEEIVEI PYTNLGRLTG 
AFKLVNKQTG KEVPYQIAYE GSPQPQLLLV QVSVPAHKSV IISAVAGQPA VVKPRTYARY
VPERKDDFAW ENDCIAFRMY GAALENFPAE NAHGIDVWTK RTPDLVLNRW YKTNDYHHDN
GQGLDYYHVG MTLGGGDIAP YLHDSLYFPK NYRTWKVLDS GPLRCTFQLG YEPWQVDGKT
VAVVKTISLD AGAQLNKMSV LYTLQQGDSL SVAAGIVKRA DPGTLLLDEK TGVLGYWEPE
HGADGITGLG LVVPVQKGHM KVTDQHLLAT AKASGKASFV YYFGAAWNKA GYYTSAAAWF
AYLQTFAAKQ ASPLEININ