Gene Cpin_6815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6815 
Symbol 
ID8363007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8538967 
End bp8540001 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content49% 
IMG OID644968948 
Productglutamate 5-kinase 
Protein accessionYP_003126417 
Protein GI256425764 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0143656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAAAC CGATATTAGT AATAAAATTT GGGACAGCCT CCATTACGCA TGAAAATGGG 
GAGCTGGATG AAACAATAGT GGCTTCAATA GCCAGGCAGG TAGCCGATCT TAAGGATGAA
TACAATATCG TATTAGTGTC ATCAGGGGCC GTGGCTGCAG GTAAGAAGTA CCTTAAGAAT
TATGGAGGTA CGATGAGCGA ACGTAAGGCA GCGGCAGCGA TAGGTAACCC CTTGCTGCTA
AGCAAATATG CCCGTTATTT CTCGCCATAT GACATTGCCA TTGCTCAAAG CCTTTGTGAA
CGGAGGCATT TCAGCAACAG GGCGCAGTTT CTTCAGCTAA AGAAGACATA TGAGGAATTA
TGGACCAGTG GCGTGATCCC CGTCGCAAAT GAGAATGATG TAGTAAGCGA CCTGGAACTG
AAATTTTCAG ATAACGACGA ACTGGCGACC CTGATAGCCG TGGGCTTTGG CGCCAGTATG
CTACTGTTCA GCACTTCTGT AGGAGGTGTC CTGGACAGGG AAGGAAAGGT CGTTCCCAAG
ATAGAAGCGA TCGATGAGTC TATCCTGTCA CTGGCAGACA CTAAAAAGTC CAATCTGGGC
CTGGGAGGCA TGGTATCCAA GCTTACTTTT GCCCGACTGG CTACCCGTAT GGGGATTAAA
GTAGTGATAT TCGGTATCCA TACTACTGAT GGTATCCTGA ACGCTATCGC CGGTAATACC
GGTACTTTAT GTCTGCCGCA GGAATGTAGT ATGCCTGCCC GCAAGAAATG GCTGGCCAGC
GGCAGCCTTG TAACCGGTCG TGTACTGGTA GACGAGGGTG CGCTCGCAGC TCTGCAGAAA
AGACGTAGTT TGCTGGCAGT AGGTGTTCTG ACCGTGCTGG AGAGATTTGA AGGCGGAGAG
GTGTTTGAGA TCGTCGATGA AGAACATAAT GTTATAGCGG TGGCGCGTGC GAAAGTTTCC
TCCGACCTGC TGTCAGATGA AGGCAAGGTG CAGAACCTGG AGATCGCACA TGCTGACGAT
ATCGTGTTGT TATAA
 
Protein sequence
MTKPILVIKF GTASITHENG ELDETIVASI ARQVADLKDE YNIVLVSSGA VAAGKKYLKN 
YGGTMSERKA AAAIGNPLLL SKYARYFSPY DIAIAQSLCE RRHFSNRAQF LQLKKTYEEL
WTSGVIPVAN ENDVVSDLEL KFSDNDELAT LIAVGFGASM LLFSTSVGGV LDREGKVVPK
IEAIDESILS LADTKKSNLG LGGMVSKLTF ARLATRMGIK VVIFGIHTTD GILNAIAGNT
GTLCLPQECS MPARKKWLAS GSLVTGRVLV DEGALAALQK RRSLLAVGVL TVLERFEGGE
VFEIVDEEHN VIAVARAKVS SDLLSDEGKV QNLEIAHADD IVLL