| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6809 |
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| Symbol | |
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| ID | 8363001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8530731 |
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| End bp | 8531477 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644968942 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_003126411 |
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| Protein GI | 256425758 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.117739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00016369 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTAAAGG AAGAACGCCT CGCTTATATA CTTCACCAGG TAAACCTGCA CAACAAGGTG
TTGTCTTCCC ATCTCAGCGA ACAGATACAG GTATCAGAAG ATACCATCCG TCGTGATCTT
GCAGAGTTGG CGCAGGAGGG AAAGATCATC AAAGTACATG GCGGCGCGTT ATCGAATTCA
TTTCATCAGG GTATTGCATC CCAGGATGTA TATGCCGTAG AAGATAAAAA GACCATTGCA
TTAAAAGCCG TTCAGCTTAT ACATGACGGC ATGTTTGTAT TAACTACAGG TGGTACTACT
ATTGCCGAAC TGGCGCGGGT ACTGCCGAGA GATCTGCAGG CTACTTTTAT TACCGTTAGC
CTGCCTGCTG CTTTTGAATA TGCGAATCAT CCGAACATAG AAGTAATTGT GATAGGGGAT
AAATTATCCA AAGGATCTAA GATCACCGTA GGGGGAGAAG CGATTTCAAA GATAAAAATG
ATCAAAGCGG ATCTGTGCTT TCTGGGTAAT AACGCAATAG ACGCAGAAGA CGGACTGACA
GACAATGACT GGGACGTTGT ACAGGTAAAA CGAGCTATGA TCAGCACTGC CAAGAAGGTG
GTGGTATTGT CTATTTCAGA AAAGATCGAC ACATCAGAAC AATTAAAGAT CTGTGATGCA
GAAGAGATCG ATGTATTAAT TACCGAGCTG CCTCCCGATT CTAAGAAATT GCAGTCATAC
AGGAAAAAGG GTATTCAGAT TTTATAA
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| Protein sequence | MLKEERLAYI LHQVNLHNKV LSSHLSEQIQ VSEDTIRRDL AELAQEGKII KVHGGALSNS
FHQGIASQDV YAVEDKKTIA LKAVQLIHDG MFVLTTGGTT IAELARVLPR DLQATFITVS
LPAAFEYANH PNIEVIVIGD KLSKGSKITV GGEAISKIKM IKADLCFLGN NAIDAEDGLT
DNDWDVVQVK RAMISTAKKV VVLSISEKID TSEQLKICDA EEIDVLITEL PPDSKKLQSY
RKKGIQIL
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