| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6808 |
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| Symbol | |
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| ID | 8363000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8527441 |
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| End bp | 8530563 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968941 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003126410 |
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| Protein GI | 256425757 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.14685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000111053 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAATGT ATCAATTATT CCGGCTTGCC AGGTGCAGGT ATCTGCTGCT TTTGCTGGTC
CTGCAGTGCT TTACCGCCGT TGCTGCTTTC GCACAGGTAA AGCTGTCCGG TAAGGTAACA
GATGAAACGG GTGCATCGCT ACCCGGCATC ACGGTAGCCA TCAGGGGGAC AAAACTGGGT
GCAACCACAT CGGTGGATGG TAACTATACC ATCAATGCTG ATCTGAACCC CGGTAGTTAC
ACACTCGTAT TTACAGGTAT CGGATTTGCA CAGAAGGAAG GTAGTGTGGA GATTGGCAGT
GCCAGCTCCT ATACACTGAA TCAACAGCTG GCTACGTCCG TATCCAAACT GGATGAAGTA
GTGATCACCG GTGCTTCTAT CGGTACTACC CGAAAACAGT TAGGGAGTTA TGTCAGCAGT
GTCAAAGCAG ATGAGTTGAG TAAAGGCGCT ACTGCTAACG TGCTCACTGC CCTGCAGGGT
AAAACAGCTG GTGCACAGAT TACACAGAAC TCCGGTGATC CTGCCGGTGG TATGTCTGTA
AAACTGCGTG GTATCAGTAC GATCAGTGGT TCTACTGAGC CACTTTACAT CATAGATGGT
GTTATTATAG ATAACTCCAC TACGCGTGTA ACCAACGCCG ACGCATCTTA TGCAGGTGGC
AGCTTTGCAG GTAATGTTGG TCAGAACCGT ATGGTGGATA TCAACCCTGC TGACATCGAA
CGTATAGAAG TGCTGAATGG CGCTGCCGCA GCTGCGATCT ATGGTTCCAG AGCGAACGCC
GGTGTTGTAC AGATCTTTAC AAAGAAAGGC GCGGGTGGTG CTCCTGTAGT GAATTTCTCT
ACCAGCTTCA ATGTAAACGA GCTGCGTAAG AAACTGGATG TGAACCAGGC GCCGGTAAAG
TTTGGCGGTA CCCCGGATGT GTCTACCCAG ACCATTCTGA CACCGACTAT CACCAATACT
ACTGCGATAC AGCGTTATGA CTACCAGGAC TATATTTTCC GCACAGGTGT TGGTACTGAT
AATAACGTAT CTGTAACTGG TGGACAGAAT AAAACGAGGT ATTATGCATC TGCGGGTTAT
CTGTACAATC AGGGTATTGT AAGAAATACA GATTTCAACC GTTACAGTTT CCGGCTGAAC
CTGGATCAGG AGTTGAACAA ATGGCTGAGC TTCAATGCTT CTGTAAATTA TATCTACAGT
AAGACAAACG AGAAACCAGA TGGTAACTCT TTCTTCTCTC CAACGAATGC AGTAACCATC
ATCGGTAACT ATTACGATCT GCAACAAAGA AATGCGTTGG GTAACCTGGT GGCAGTCGGA
GAGCGCGGTC GTGTAAACCC GGTTTCTATC ATTGAAGATT TTAAACAACA ACAACAGACC
AGCAGGATTA TCACCGGTGC AGGTTTAAAA CTGACGCCGT TCAAAAACCT GACGATAGAT
TATCATATGG GTATTGATAA CTATAGCCAG GATGGTACTA CCTTCATTCC CCCTTTCGCT
TATAATGTAA GCCTGTCCTT TTTCGGCGGC GGCGCTAACC TGGATCCTAC GCAGAACGGT
TATGCGAGCA CCGGTGTTAA TAATTCTTTC CTGATCAACC ACGATATCAA TGCGACTTAT
AATGCGCAGA TCACGCCGGA CCTGTCATCT GTAACACAGG TAGGTTATTC TTTGCAGTAT
CAGAATGTGC ATTACTCACT GCAACAGGGT AGAGGTTTAC CACCATTTGT GCAAACCGTA
AGTGGTGCAG CTACACTGAT ACCAGGTACA GATGAACGAA CCAAACTATC TATCTCTGGT
CAGTTCATTC AGCAGAACTT CAAATACCGT GATCAGTTGT TTGTAACTGG TGCATTAAGA
CGTGATGGTT CTTCTGTATT TGGTCAGGAT GAACGTAATC AGATCTATAC TAAACTGAGT
GGTAGCTATG TGTTGTCAGG TACAGATTAC TGGAAAGATC TGGGTGTGTC CAATTGGTGG
AACCTGTTCA AACTCAGGGC TGCTTATGGT CAGTCGGGTA ACCTGACAGG GATCCCTGCT
TATGGACGTT TCAATACCTA CAAAGCGATG GCGTTTGTAG GTGCGGCTTC GTTTACATCT
CCGACCACTT ACACCAACCC GGATATCAAA CCTGAGAGAC AGGAAGAACT GGAGTTCGGT
ACAGACATGG CTTTTGCGAA TAACCGCATC AACCTTTCTG TGAACTACTA CACCAAAAAG
GTAAAAGACC TGCTGATCGC ACGTGCAATT GCACCTACAC AAGGTTACAG CACCCGTCTT
GATAATATCG GGTCTCTTTC TAACAAAGGT TTTGAAGTAG TATTGAATGT AGTGCCGGTG
AAAACAAAGA GCTTCAACTG GGATATGACG GCTATCTTCA ACCGTAACAG AAACAAAGCA
ATCGACATCG GACAGTCTAT CATCCTGTAT TCAACGGTGA GTGGTGCACC GGTTGCGATT
GCCAATGGTG AGCCGATTGG CTTCTTCTAC GGTACTTTCT TTGCACGTGA CGCCAGTGGT
AACCAGCTGA AAACAGCTGC CGGTATTCCT GTAACAGAAG CAGGTGTACA GAACACACCG
TTCTCCTACA CACCGGCAAG AGATCCTAAT ACAGGTTTGC CACCAACTAC CGGCGTAACT
GCTTTACAAA GAAAAATTGG TGATCCGAAT CCTGACTGGA CTGGTACACT GACCAACGAC
TTCACCTATA AAAAATTCAG TCTGCATACA CAGGTTGACT TTGTACAGGG TGTTGACGTA
TTCAATGCTG ACTTCAGAAC AAGACAGGGT GTGGATAATG GTAAAGTGGC TGAACAGGAA
GACCTGGGTT TATTACCACG TGGATTTATT GCGGGTAACT ACAACATCCA GGAGTGGAGA
GTGGACGATG GTTCTTTTGT AAAACTGAGA GAAGTATCCC TCAGTTATAA TATCGGTAAA
ATTAAAGGTC TGAGCGATCT CACAGTAAGT GTGGGCGGAC GTAACCTGCA TTCATGGGAT
AACTACAAAG GATATGATCC GGAAGTGAAT GCGGCAGGTC AGAGTACTGT ATTGCGCGGT
ATTGATTTTG GTAGCGTACC AGCTCCAAGA ACGTATAATG TTGCACTGCG CGCCAGATTC
TAA
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| Protein sequence | MRMYQLFRLA RCRYLLLLLV LQCFTAVAAF AQVKLSGKVT DETGASLPGI TVAIRGTKLG
ATTSVDGNYT INADLNPGSY TLVFTGIGFA QKEGSVEIGS ASSYTLNQQL ATSVSKLDEV
VITGASIGTT RKQLGSYVSS VKADELSKGA TANVLTALQG KTAGAQITQN SGDPAGGMSV
KLRGISTISG STEPLYIIDG VIIDNSTTRV TNADASYAGG SFAGNVGQNR MVDINPADIE
RIEVLNGAAA AAIYGSRANA GVVQIFTKKG AGGAPVVNFS TSFNVNELRK KLDVNQAPVK
FGGTPDVSTQ TILTPTITNT TAIQRYDYQD YIFRTGVGTD NNVSVTGGQN KTRYYASAGY
LYNQGIVRNT DFNRYSFRLN LDQELNKWLS FNASVNYIYS KTNEKPDGNS FFSPTNAVTI
IGNYYDLQQR NALGNLVAVG ERGRVNPVSI IEDFKQQQQT SRIITGAGLK LTPFKNLTID
YHMGIDNYSQ DGTTFIPPFA YNVSLSFFGG GANLDPTQNG YASTGVNNSF LINHDINATY
NAQITPDLSS VTQVGYSLQY QNVHYSLQQG RGLPPFVQTV SGAATLIPGT DERTKLSISG
QFIQQNFKYR DQLFVTGALR RDGSSVFGQD ERNQIYTKLS GSYVLSGTDY WKDLGVSNWW
NLFKLRAAYG QSGNLTGIPA YGRFNTYKAM AFVGAASFTS PTTYTNPDIK PERQEELEFG
TDMAFANNRI NLSVNYYTKK VKDLLIARAI APTQGYSTRL DNIGSLSNKG FEVVLNVVPV
KTKSFNWDMT AIFNRNRNKA IDIGQSIILY STVSGAPVAI ANGEPIGFFY GTFFARDASG
NQLKTAAGIP VTEAGVQNTP FSYTPARDPN TGLPPTTGVT ALQRKIGDPN PDWTGTLTND
FTYKKFSLHT QVDFVQGVDV FNADFRTRQG VDNGKVAEQE DLGLLPRGFI AGNYNIQEWR
VDDGSFVKLR EVSLSYNIGK IKGLSDLTVS VGGRNLHSWD NYKGYDPEVN AAGQSTVLRG
IDFGSVPAPR TYNVALRARF
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