| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6806 |
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| Symbol | |
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| ID | 8362998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8524585 |
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| End bp | 8525943 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968939 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003126408 |
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| Protein GI | 256425755 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00560113 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000369598 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAAAAC ACTACCTATT GCTGCTGGCA GCTTTGTTAT GTTATTGCCC GTTAACCTTT
TCACAGAAAA AGATTGGCTT TGAAAAACCC GGAGACCAGC AGAAAAGAAT GGCCTGGTGG
ACCAATGACC GTTTTGGTAT GTTCATTCAC TGGGGATTGT ATGCCTTACC CGCCCGGCAT
GAGTGGGTGA AGAAGCGGGA ACAGCTGACC AATGACGATT ATCAACAGTA TTTTGACCAG
TTCAACCCGG ATTTGTATAA TCCGAAGGAG TGGGCTAAAA TGGCCAAAGC CGCCGGAATG
AAGTATGCTG TTATTACCAG CAAACACCAC GAAGGATTTT GTCTGTTTGA CTCAAAATAT
ACTGATTATA AAGCCCCTAA TACCCAGGCA AAGCGTGATC TGATAAAGGA ATGGGTAGAT
GCTTTCAGGG CGGAAGGTCT GAAAGTGGGT TTTTACTATT CCCTGCTGGA CTGGCACCAT
CCTGATTTTA CGATAGACAA GCACCATCCG CAGCAGCCGG CTGGCGATAG CGACACCGCT
TATGCCAGGC TGAATCAGGG AAAGGACATG AGCAAATACC GCGAATACAT GTATAACCAG
ATCAAGGAAC TGCTCACCAA ATATGGTAAG ATCGATATCA TGTGGCTGGA CTTTTCCTAT
CCTGGTAAGA ACGGTAAAGG CCGCGACGAC TGGGGATCGC TGGAGCTGAT GAAAATGATG
CATAAGCTGC AACCAGGGAT TATTGTGGAT AACCGCCTCG ACCTGAATGA CTATGAGGAC
GGCTTTGACT TTGTCACCCC TGAACAGACG CAGGTGGCGG AATGGCCGAC TGTAAACGGC
AAAAAGGTAG CCTGGGAGAC CTGTCAGACC TTCTCCGGTT CCTGGGGATA TTATCGCGAT
GAAGACAGCT GGAAGAGCCC GTCTCAATTA TTGCAGCTGT TGATCGGTTC TGTGAGTAAA
GGAGGGAACC TGTTACTGAA TGTAGGTCCT ACCGCCCGGG GTTTGTTTGA CTACCGTGCA
AAGGATGCAC TGGGTGCAAT CGGAGAGTGG ATGGCTGTAA ACAGTCCTTC CATCTACGGC
TGTACACAGG CGCCAGAAGA GTTCCGGGCG CCTAACGGAA CGATGCTGAC CTACAATCCG
ACCACCCGTA AGCTATACCT ACATTTACTG TCATGGCCAC TCAATAAACT GGTGCTGCCA
GGATTTAACC CAAAAGTTAA ATATGTGCAA TTCCTGCATG ATAATTCAGA AATAAAGTAT
ATTGGAAAGG AAAATCAGGG CAGCAATGAT CTAGTACTCA CGATGCCTTT GAAAAAGCCT
CCGGTGGAGA TACCAGTGAT TGAGCTGACT TTGAGATGA
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| Protein sequence | MRKHYLLLLA ALLCYCPLTF SQKKIGFEKP GDQQKRMAWW TNDRFGMFIH WGLYALPARH
EWVKKREQLT NDDYQQYFDQ FNPDLYNPKE WAKMAKAAGM KYAVITSKHH EGFCLFDSKY
TDYKAPNTQA KRDLIKEWVD AFRAEGLKVG FYYSLLDWHH PDFTIDKHHP QQPAGDSDTA
YARLNQGKDM SKYREYMYNQ IKELLTKYGK IDIMWLDFSY PGKNGKGRDD WGSLELMKMM
HKLQPGIIVD NRLDLNDYED GFDFVTPEQT QVAEWPTVNG KKVAWETCQT FSGSWGYYRD
EDSWKSPSQL LQLLIGSVSK GGNLLLNVGP TARGLFDYRA KDALGAIGEW MAVNSPSIYG
CTQAPEEFRA PNGTMLTYNP TTRKLYLHLL SWPLNKLVLP GFNPKVKYVQ FLHDNSEIKY
IGKENQGSND LVLTMPLKKP PVEIPVIELT LR
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