Gene Cpin_6804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6804 
Symbol 
ID8362996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8523069 
End bp8523497 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content47% 
IMG OID644968937 
Producthypothetical protein 
Protein accessionYP_003126406 
Protein GI256425753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0100137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000165642 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATTCA AACGGACCTA CCTGGTACCG CTGGCCCTAT TGCTGGCAGC GACATTATGC 
TCTTTATCCA CACCTCCGGA GGAAAAGGCG AAAAATCTGA AAGTATTACC TAAGAACATC
AGCCATGACG ATCTGATGAA GGAGATGCGC AGCTACAACA AGGCTTTAGG CGTTAAGTGT
GACTACTGTC ATGCTAAACT GCCGGACAAT CCGCAGAAAA TGGACTTCGC CAGCGATGCA
AAGGAAGAGA AGGAAACGGC GCGTGAAATG CTGAAAATGA CCTTCCGTAT TAATAAGAAG
TACTTTAAGT CTGGTAAGGA TGAGAAAGGT ATGCAGATCA TGACCGTCAC CTGTTATACC
TGCCACAACG GACAGAAAGA ACCGGCATCG AAGCCAGCAG GAGGAGAAGA AGCACCTCAT
CAGCACTAA
 
Protein sequence
MQFKRTYLVP LALLLAATLC SLSTPPEEKA KNLKVLPKNI SHDDLMKEMR SYNKALGVKC 
DYCHAKLPDN PQKMDFASDA KEEKETAREM LKMTFRINKK YFKSGKDEKG MQIMTVTCYT
CHNGQKEPAS KPAGGEEAPH QH