| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6801 |
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| Symbol | |
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| ID | 8362993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8520352 |
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| End bp | 8521143 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644968934 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003126403 |
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| Protein GI | 256425750 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0053445 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000000168997 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACTCC TGACCGGTAA AATAATCTTA CTGACGGGCG GCTCCTCCGG CATCGGATTC
GAGTGTGCCC TGAAATATGC CGAAGCAGGC GCCATCGTTG TGATCATATC CAACGATGCG
CCTGCTCTCG CATCAACTGT CAATATATTA GGTCATCCAC ATCATGCCAT CTTCGCAGAC
ATTTCACAAT CAGCAGACGT GGAAGCAGCC ATCCATGAAA CATTGACGAA GTATGGCAGA
ATAGACGTTA TCCACAATAA CGCCGGCATT GCCCATCCTT CCACTCCCTT ACACGAAACC
AGTGAAGCAG AATGGGACCA GGTGATGAAC ACCAATCTGA AAAGCATCTA TCTGACCACA
CGATATGGCA TTACAGCCCT GAAAGAAAGC AGGGGCTGTA TTATTAATAC CAGTAGTCTG
GTAGCGGAAA TCGGGCAGGA AAATCATGCT GCGTACACAG CTAGTAAAGG TGCGGTCAAC
ACGCTCACCA AATCCATGGC ACTCGACTAT GCGCCTTTTC AGATCCGTGT CAATGCGGTA
GCTCCAGCCG GTGTATGGAC GCCCATGTTG AGAGAATGGG GGAAGCACCA ACCTAATGCA
CAGGGATTTG AACAGTATAT GAATGATATA CATGTGCTGG GGTATTGTCC GGAGGGAGAT
GTTATTGCAG ATGCCTGCGT GTTTCTGGCG TCGGATAAGG CACGGTTTAT TACCGGACAT
ATTCTGCATG TGAGTGGTGG CGCGGAGTTG GGGTATAGGG CGGCGATGCA GGCAGCGGAT
GTGACTTTGT AG
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| Protein sequence | MQLLTGKIIL LTGGSSGIGF ECALKYAEAG AIVVIISNDA PALASTVNIL GHPHHAIFAD
ISQSADVEAA IHETLTKYGR IDVIHNNAGI AHPSTPLHET SEAEWDQVMN TNLKSIYLTT
RYGITALKES RGCIINTSSL VAEIGQENHA AYTASKGAVN TLTKSMALDY APFQIRVNAV
APAGVWTPML REWGKHQPNA QGFEQYMNDI HVLGYCPEGD VIADACVFLA SDKARFITGH
ILHVSGGAEL GYRAAMQAAD VTL
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