Gene Cpin_6798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6798 
Symbol 
ID8362990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8515489 
End bp8516736 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content47% 
IMG OID644968931 
Producthypothetical protein 
Protein accessionYP_003126400 
Protein GI256425747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000307984 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000281527 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCATA TACAACAGCT GCTGCTGTTA TTCTTTATAT CAGGCTTACT GCCTTTCTCC 
TGTAAGGAGA TTGACGGTTA CAACGAAATC GTATCTACTG ACATGACCAA ACCGGATCCT
GTCAAAGATG TAAAAGTGGT GAACTTTAAC GGAGGCGCCT ATATCACCTA TACGCTGCCT
AAATCATCCA ATATCCTGTA TGTACAGGCC ACATACAAGA TCAATGATAA GGTGAGCAGG
GAAACCAAAT CCTCTTATTA TTCTGACAGT GTCACCGTCA GCGGTTTTGC AAAGAGTCAG
GACTATGATG TGGAATTACG CGTAGTAAGC CGGGCACAGG TATCTTCTGA ACCGGTGAAT
GTAAAAGTAC ATCCGGATAC GCCACCTTAT CTGCTGTCAC GTCCTACGGT AACCATGCGC
CAGGATTTCG GCGGCGTACA GATAGACGCG ATCAACATGG CAAAAGCCAA TCTGGGCATC
ATTGTTATTG CACCTGATCA GACCAACAAG TATCAGATTA TCGCGCAGAA CTATACGGAT
AAAGATACCA TCTCGTTCAG TCTGCACGGT TATGATACCA TTCCACAGAA GTTCGGCGTA
TATGTAACGG ACCAGTGGGG TAACATCTCC GACACATTGC TGTCTACTAT TACGCCTGTT
TACGAGGCAC AAATGGATAA ATCACAGTTC CGTAGCTATC AGCTGGGAAC AGATGCCAGA
ACCGGCTTCG GATGGTCAAT AGAAAACCTC TGGAATAACA ATACAGGCTC TCCGGGTTAT
CATACCGAAC AACCGATACA ACCGCTGGTA TGGCCGGCAG TGATCACATT TGACATGGGT
AGAGCTGCAA GGCTGAGCCG GTATACGATC TGGAACAGGG GTATTGATGG AAGTGGAACC
TGGTTATGGC AGGCCGGTGC GCCAAGAACA TGGGTATTGT GGGGACGTGA GGATAGTCCG
GTAGATGAAA CAATGCCGGA TGAAAATCAC CTTCCGCCGG TAGGTGGTAT GACGCCAAAA
GGATGGATCA ACATGGGTTT CTTTACAGCA CCTGACAAAC CATCCGGCTT ACCGAATCCA
CAGTACAACA ATACCGATCT CCTGTTCTGG AACGCAGGTT TTAGTTACAA CTTTTCCCTG
AATCTGCCGA AAGTGAGGTA CATGCGTTTT GAATGTGTTT CCAATATGGC GCAGACCAAC
AACTTCTTTA ACGTTACCGA ACTGTCATTC TGGGGCGATC CGAGATAA
 
Protein sequence
MRHIQQLLLL FFISGLLPFS CKEIDGYNEI VSTDMTKPDP VKDVKVVNFN GGAYITYTLP 
KSSNILYVQA TYKINDKVSR ETKSSYYSDS VTVSGFAKSQ DYDVELRVVS RAQVSSEPVN
VKVHPDTPPY LLSRPTVTMR QDFGGVQIDA INMAKANLGI IVIAPDQTNK YQIIAQNYTD
KDTISFSLHG YDTIPQKFGV YVTDQWGNIS DTLLSTITPV YEAQMDKSQF RSYQLGTDAR
TGFGWSIENL WNNNTGSPGY HTEQPIQPLV WPAVITFDMG RAARLSRYTI WNRGIDGSGT
WLWQAGAPRT WVLWGREDSP VDETMPDENH LPPVGGMTPK GWINMGFFTA PDKPSGLPNP
QYNNTDLLFW NAGFSYNFSL NLPKVRYMRF ECVSNMAQTN NFFNVTELSF WGDPR