| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6792 |
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| Symbol | |
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| ID | 8362984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8506408 |
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| End bp | 8507415 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968925 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003126394 |
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| Protein GI | 256425741 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00100937 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGAACAGC AGGAGCTTTA TTTACTGATC ACCAGGCATT TTAACGAACA GACCGTCCCA
TGGGAAGAAG ATTTCCTGGC TGAATGGCTG GAAAGCGCAG AAGAAAACAG ACTGACTTAC
AGCGTACTGA AAGATATATG GCAGAGCAGC CATCAGCAGC ACGATGAAGT ATTGGTGAAT
GCAGCACTGC GGGATGTAAA GCAACGTATC AGCAGCCGTC AGCAATCCCG ATTGATCACT
ATTGTTAAAC GATACCGTAC GCAGATCGCG GCCGCAGCTG CTGTAGCAGG TATTATAGCA
GCTAGTGTAT TTTATCTGCG CCGGAATAGT GATAGTAACG CTATCGCTTA TATGGAGAAA
AGGAGTTTGC CCGGACAGGT ACTGAAAGTG ATTATGCCAG ACAGTACAAT AGTGCATCTT
GCCCCACAAA GTAGTATCCG TTATGCACCC GATTTCGGAA AGGGTGACAG GAAAATCTTC
CTGGAAGGTG AGGCGTTTTT CGACGTCAGC AAAGATGCGC ATCATCCTTT TACCGTAGCT
GCAGGACAAT TGTCCGTACA GGTATTAGGA ACGCGTTTTA ATGTCGCATA TTATAAAGGT
GCAGACAGTG CTGCTGTATC GCTGGTAGAC GGAAAGGTAC AGGTGAGTGT TCCCGCTCAG
CCCAAACCGT ATGAACTACA ACCAGGACAG GAATTGTATT ATGACAGTCA TGCACAACAT
GCCTGCACCA GGGATTACGA TGTGGAGTCG GTAACCGGAT GGACGTCCCG ATTACTGGTA
TTCCGCAACG AAACACTGGC GGTGGTTGCC CGCAGACTGG AGCAATTGTA TGATGTCGAG
ATCACCTTCG CAGACCCGGC TATGGCTCAT TACAAACTGT TTGCAAAGTT TAATGACAAG
CCACTCAATT ACATTCTGAA CGTGATCAAA GCAACGGACA ATCTTGATTA CACCATCGAC
GGAAAAAAGA TCCGATTTAC CAACAACAAC GCCTATCAAT CACGCTAA
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| Protein sequence | MEQQELYLLI TRHFNEQTVP WEEDFLAEWL ESAEENRLTY SVLKDIWQSS HQQHDEVLVN
AALRDVKQRI SSRQQSRLIT IVKRYRTQIA AAAAVAGIIA ASVFYLRRNS DSNAIAYMEK
RSLPGQVLKV IMPDSTIVHL APQSSIRYAP DFGKGDRKIF LEGEAFFDVS KDAHHPFTVA
AGQLSVQVLG TRFNVAYYKG ADSAAVSLVD GKVQVSVPAQ PKPYELQPGQ ELYYDSHAQH
ACTRDYDVES VTGWTSRLLV FRNETLAVVA RRLEQLYDVE ITFADPAMAH YKLFAKFNDK
PLNYILNVIK ATDNLDYTID GKKIRFTNNN AYQSR
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