| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6791 |
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| Symbol | |
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| ID | 8362983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8502979 |
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| End bp | 8506395 |
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| Gene Length | 3417 bp |
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| Protein Length | 1138 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644968924 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003126393 |
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| Protein GI | 256425740 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00672159 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTCCTT TTTACCAACA TCTGAGTATC GCACGCAGTA AGGCAGTTTT ATGCCTGTTG
CTTTGCTGTG TGTTTTCATT GCCATTTACA ACCGTAAAGG CAGGGATGCG CGCAGACCTG
CACAAGGTAC CCTGTTCCCT GACCGTACAT AATAAACCAT TGGAAGAAGT GTTCGAACTG
ATCGAACAGC AAACTCATTA TGCTATCATC TGTGTGGACC AGTCCGGACT GATGGATAGA
AAAGTAAATC TTAACGCGAG GAATACAACG CTGGAAAACG TATTACAGCA GCTCGCAGGA
CAGGTTGCAT TCAATTACAA ATGCCTGGAT AATAACATCA TTGTAAAAGC AGGTGTTGTT
AATAACCCCG GAGATCCGGC GGAGAAAACC GTTTCAGGTA AAGTAACGGA TGCTAAAAAA
CAACCTTTAC CTGGTGTGTC AATCATGGTG AAAGGTACCA AACGTGGTAC TATCTCTACC
GATAATGGCG ACTTCCAGAT CAAAGCAAAC GAAGGCGAAG TTTTACAGTT CTTTTTCACA
GGATTTCAGC CGTATCAGTT GACGGTTGGT AAAGGTGAAA TCTATCAGGT TACCTTACTG
GATGACGAAA AGAAACTGTC TGAAGTACTG GTAACAGCGC TGGGTATCAA AAAGGAAAAG
GCAAAAGTTG GTTATTCTGC ACAGGAAGTA AAAGGTGCTG ATCTCGTGAA AGCACGTGAG
CCGAACGTGA TCAGTTCACT GACAGGCCGC GTTGCGGGTC TGACAATCAG AAATACGACT
GACCTCTTCC AGGATCCGGG TATTTCCCTG CGTGGTGCAA AACCATTGAT CGTCATAGAT
GGTATCCCTG ATCAGTCAGC CGATCTTTAT AAAATCAATG CAGATGATAT CGAAAGTATG
ACCGTGTTGA AAGGTGCTTC TGCATCCGCA CTGTACGGTT CCATCGGTTA TAACGGCGCT
ATCATGATCA CTACCAAAAG AGGTGGTTCT AAAGATCTGA GCGTTGATTT TAACTCTTCT
ACACAATTCC AGACCAGCTT TATCCGTATC CCTAAGGTGC AGACCACTTA TGGTAACGGT
TTTAAAGGTG AGTACGAGTA TATTGACGGT TCTGGTAGCG GCCCTGAAGG TTTCGGCTGG
ATATGGGGTC CTAAACTGGA TCAGCGCGAT CCTTCCACTC CAAGTGGCTA TCATGAAACA
CCGCAGTTCA ACAGCCCTGT AGATCCTACT ACCGGCAAAC TGGTACCATT GCCTTTCCTG
TCCCGTGGTA AAGACAATGT GAAGAACTTC TTCAGAACAG GTGTTATCAC CAGTAACAAT
ATCAGCTTTA CGAAATCAGG TGATAACGGT ACTTTCAGGG CTTCTGCTTC TCATATCTAC
CAGCAGGGTA TCGTACCTAA TACAGACCTG AAGAATACTT CTTTTAACAT GGCAGGTAAT
TACAACCTGA CAAAGAACTT CAGCATTAAC GGTCGTATCA GCTACAATAA AGAGTATACA
CACAATTTCC CTGAGACAGG TTATGGTCCT ACCAACTACC TGTACAACCT TATCCTGTGG
ACGGGGCCGG ATATCGATGT ACGTGATCTG CGTAATTATT GGGTGCCGGG TAAAGAAGGT
ATACAACAGC GCCACTACAA TATCTCTTAT TATAACAACC CTTATTTCCA GGCATATGAA
TACCTGAGAG GGTATGATAA AAATAACTCT TTTGGTTCTG TGGATCTGGA TTATAAGATC
AGTCCTTCTT TCAGTGCAAA ATTCCGTACC GGTATTAATC AGTACAGCCT GAACCGTAAC
TATAATGAGC CTAAAAGCTA TATCGGCTAT GGTAATAAAT CAAGAGGTCA GTATACAATT
ACTTCCAACA CCTATTTCGA TGTAGTGTCT GATCTGATCG TAGACTATAA CCATACTTTC
AGTGAGCACT TTAAGGTGCA TGCGCAGGCA GGTGGTTCCA ACTACTATCG TAATTTCAAA
GCAGCATCCA GTAATACAGA TGGTCTGACC ATCCCTGGTC TGTACAATCT TGGTAACTCT
GCGAATGCGG TACAATCTAC CAACTCGCTG GAAGAACGCA GAACAGCGAG TGTATATGGT
ATTGTTGACG TAGAACTCTA CAATGCGATC TATCTTTCCC TGACAGGACG TAATGACAAG
ATCTCCAGGT TACCCGTTGA GAACAATAGT TTCTTCTACC CTTCCTTATC CGGTTCGGTA
GTGATATCTC AGCTGACCCG TTTACCTGAG TGGTTCTCTT TCCTGAAAGC AAGAGGTGCT
GTTTCCCGTG TATCCAGCGG AACACTGGAT GATAGCTATA CTTATGGTTA TCTGCCTTCC
TATGACAAAG GTACTACCTG GGATGGCGTA CCTGGTTTGA AATACAAGGA TATTATCATG
AACGCTTCGC TCCATCCGCA GACTTCCGAT AGCTGGGAGG CTGGTGTGGA TGCCAAGTTC
TTTGGTAATA AACTGGGCTT TGAACTGACC TATTTCCAGA CGAAAGATTA TAACAACATC
CTGAGCATCC CGGTATCACT GGGTAGCGGT TTTGCCAGCA GACTGGAAAA TGGTCACGTA
TATCAGCGCA GAGGTGTTGA ATTTGTAACG ACTGCCACAC CGATCCGTAA AGATAAATTC
AGATGGGATG TGATGCTGAA CCTGAGTACT TATCGTCGTC ACCTGAAAGA GATTACCGGT
GGTAATAAAC TGGGTTATCT GAAAGCAGGC GACAGAACAG ACAGGATCTT TGCAAATGTT
TATCAGAAAG ATCCTTCCGG TAACATTATT TACAGGGCAG ATGGATTCCC GTTAGAAGAT
AACATCCAGC GTTTTGTAGG TAATTCAGAT CCTGATCTGA TCTACGGTCT GGAGAATAGT
TTCTCATATG GCAATTTCAC ACTGCGTTTC CTGGTGGATG GCCGTCTTGG TGGATTGATG
TATTCTACTA CCAACCAGAA AATGTGGTGG GGTGGTACAC ATCCGGGTAC TGTTAATCAG
TTCAGAGATG ACGCCAATGA CAATAAATCA ACATTCGTAG GTAAAGGTGT GGTAGTCACT
TCCGGTCAGG CTACTTATGA TGCTGATGGT AATATCGTAA GTGATAACAG AACATTTGCG
CCTAATACAC AGGGTGTGAA TTATATCGAC TACATGACCA ACACCAGCAA TGGTGCAGAT
GTGAATTACA ACTACTATTC ACAGAGCTTC CTGAAACTGA GAGAATTGAC ACTCACCTAC
AGGGTACCCT CCAAATGGCT GAAAGGTCGT GTATTCCGTG CGGCAGATAT CTCTGCTGTA
GGCCGTAACC TGCTGTTATT CGCCAAAATT CCGAACGTTG ATCCGGATTC AGGTGTGGAT
AACTTACAGA CGCCTTCTAC AAGAAGCATC GGTGTGAACC TTAACCTTAA ATTCTAA
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| Protein sequence | MFPFYQHLSI ARSKAVLCLL LCCVFSLPFT TVKAGMRADL HKVPCSLTVH NKPLEEVFEL
IEQQTHYAII CVDQSGLMDR KVNLNARNTT LENVLQQLAG QVAFNYKCLD NNIIVKAGVV
NNPGDPAEKT VSGKVTDAKK QPLPGVSIMV KGTKRGTIST DNGDFQIKAN EGEVLQFFFT
GFQPYQLTVG KGEIYQVTLL DDEKKLSEVL VTALGIKKEK AKVGYSAQEV KGADLVKARE
PNVISSLTGR VAGLTIRNTT DLFQDPGISL RGAKPLIVID GIPDQSADLY KINADDIESM
TVLKGASASA LYGSIGYNGA IMITTKRGGS KDLSVDFNSS TQFQTSFIRI PKVQTTYGNG
FKGEYEYIDG SGSGPEGFGW IWGPKLDQRD PSTPSGYHET PQFNSPVDPT TGKLVPLPFL
SRGKDNVKNF FRTGVITSNN ISFTKSGDNG TFRASASHIY QQGIVPNTDL KNTSFNMAGN
YNLTKNFSIN GRISYNKEYT HNFPETGYGP TNYLYNLILW TGPDIDVRDL RNYWVPGKEG
IQQRHYNISY YNNPYFQAYE YLRGYDKNNS FGSVDLDYKI SPSFSAKFRT GINQYSLNRN
YNEPKSYIGY GNKSRGQYTI TSNTYFDVVS DLIVDYNHTF SEHFKVHAQA GGSNYYRNFK
AASSNTDGLT IPGLYNLGNS ANAVQSTNSL EERRTASVYG IVDVELYNAI YLSLTGRNDK
ISRLPVENNS FFYPSLSGSV VISQLTRLPE WFSFLKARGA VSRVSSGTLD DSYTYGYLPS
YDKGTTWDGV PGLKYKDIIM NASLHPQTSD SWEAGVDAKF FGNKLGFELT YFQTKDYNNI
LSIPVSLGSG FASRLENGHV YQRRGVEFVT TATPIRKDKF RWDVMLNLST YRRHLKEITG
GNKLGYLKAG DRTDRIFANV YQKDPSGNII YRADGFPLED NIQRFVGNSD PDLIYGLENS
FSYGNFTLRF LVDGRLGGLM YSTTNQKMWW GGTHPGTVNQ FRDDANDNKS TFVGKGVVVT
SGQATYDADG NIVSDNRTFA PNTQGVNYID YMTNTSNGAD VNYNYYSQSF LKLRELTLTY
RVPSKWLKGR VFRAADISAV GRNLLLFAKI PNVDPDSGVD NLQTPSTRSI GVNLNLKF
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