Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6788 |
Symbol | |
ID | 8362980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8499735 |
End bp | 8500268 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968921 |
Product | hypothetical protein |
Protein accession | YP_003126390 |
Protein GI | 256425737 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.119156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCAA GACCTCAACC CGGCGAATTT ATGCCCTACC AGGAAGTATA CATTAACAGT GTCGGCGATG CAGAAGTACC CGCTATCACA GAAGAATTAA AGGACAGTAC GTATGCGTTT TTTTCGAAGA TACCTGAGGA AAAAGGAAGT TATGCCTACG CTCCGGGCAA GTGGACAATC AAGGAAACTT TGGGACATAT GATCGATACA GAGCGTGTAT TTGCGTACCG GCTGATGTGT TTTGCCCGGG GAGAGCAACA GGCGTTACCC GGCTTTGAGC AGGATGATTA CGTCCTGAAC TCATTTGCCA ATGACCGCTC CTTGCAGGAA CTGGCAAATG AATTCAGGGT GGTACGTGAG TCGACGATAT ACCTCTTACG TAATCTGAAA AAAGAGCAGG AAACAATTAT GGGCATTTCC AGCGGGAATC CAATTTCTAT AAGAACATTA GCCTATATCA TTCCCGGCCA TGAACTGCAC CATCTGCGGA TACTGAAAGA GCGATATTTA CCTGGACTTA ATATCCAGGT CTAA
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Protein sequence | MISRPQPGEF MPYQEVYINS VGDAEVPAIT EELKDSTYAF FSKIPEEKGS YAYAPGKWTI KETLGHMIDT ERVFAYRLMC FARGEQQALP GFEQDDYVLN SFANDRSLQE LANEFRVVRE STIYLLRNLK KEQETIMGIS SGNPISIRTL AYIIPGHELH HLRILKERYL PGLNIQV
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