Gene Cpin_6788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6788 
Symbol 
ID8362980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8499735 
End bp8500268 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content46% 
IMG OID644968921 
Producthypothetical protein 
Protein accessionYP_003126390 
Protein GI256425737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.119156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAA GACCTCAACC CGGCGAATTT ATGCCCTACC AGGAAGTATA CATTAACAGT 
GTCGGCGATG CAGAAGTACC CGCTATCACA GAAGAATTAA AGGACAGTAC GTATGCGTTT
TTTTCGAAGA TACCTGAGGA AAAAGGAAGT TATGCCTACG CTCCGGGCAA GTGGACAATC
AAGGAAACTT TGGGACATAT GATCGATACA GAGCGTGTAT TTGCGTACCG GCTGATGTGT
TTTGCCCGGG GAGAGCAACA GGCGTTACCC GGCTTTGAGC AGGATGATTA CGTCCTGAAC
TCATTTGCCA ATGACCGCTC CTTGCAGGAA CTGGCAAATG AATTCAGGGT GGTACGTGAG
TCGACGATAT ACCTCTTACG TAATCTGAAA AAAGAGCAGG AAACAATTAT GGGCATTTCC
AGCGGGAATC CAATTTCTAT AAGAACATTA GCCTATATCA TTCCCGGCCA TGAACTGCAC
CATCTGCGGA TACTGAAAGA GCGATATTTA CCTGGACTTA ATATCCAGGT CTAA
 
Protein sequence
MISRPQPGEF MPYQEVYINS VGDAEVPAIT EELKDSTYAF FSKIPEEKGS YAYAPGKWTI 
KETLGHMIDT ERVFAYRLMC FARGEQQALP GFEQDDYVLN SFANDRSLQE LANEFRVVRE
STIYLLRNLK KEQETIMGIS SGNPISIRTL AYIIPGHELH HLRILKERYL PGLNIQV