Gene Cpin_6776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6776 
Symbol 
ID8362968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8486352 
End bp8487173 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content45% 
IMG OID644968909 
Product40-residue YVTN beta-propeller repeat protein 
Protein accessionYP_003126378 
Protein GI256425725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA TATTGCAGGG AATATTGATC TGTTTTTGTT CTCTGACCCT CCTTTCCGTA 
CAAGCTCAGA AAAATAAACC TTTTAAAGTA CTCGGTTTCT CCACAGCTTT ACATGACCAG
GCGCATATCA GTTTTGTACA TGAAGCGAAC CGCTGGTTTG CTGACATGGC AAAACGGTAT
CATTTCACCT ACGATTCTAC TAATGACTGG AATAATCTCA ATACAGACGT ATTAGCGGAA
TACCAGGTAG TCCTCTTCCT TGACACCAGA CCCGATACGC CTACCCAGCG GGAAGCTTTC
AGAAAGTATA TGGAAAATGG CGGTGCATGG ATGGGCTTTC ATTTTTCTGC TTTTGCACTT
ACGCCTTCTG ATTATCCGCA GAACTGGGAC TGGTATCATA ACGAATTCCT GGGTTCAGGC
TCCTATGGCA GTAATACCTG GCGACCTACT TCCGCCATTC TGCGTGTAGA ACATCCGGAA
CATCCTGCCA TGAAACACCT GCCGGCGACT TTTAAGTCAT CGCCTAATGA ATGGTACAGA
TGGTCCAATG ACCTGAAAGC TAATAAGGAT ATTGAGATTC TGTTATCGAT TGATCCAGCG
AGTTTTCCGC TGGGGACCGG GCCTAAACCA CATGAGATCT GGCATAGCGG ATATTATCCG
GTTGTGTGGA CAAACAGGCG TTACAAGATG CTCTACATGA ATATGGGGCA TAATGATATT
GATTATGAAA ACCATACCAA TAGGGACCTT TCTCATACCT TTGACAACAA GCTGCAAAGC
CGCTTTATAC TCGATGCGTT GTTCTGGCTT GGAGGTCGTT AA
 
Protein sequence
MKRILQGILI CFCSLTLLSV QAQKNKPFKV LGFSTALHDQ AHISFVHEAN RWFADMAKRY 
HFTYDSTNDW NNLNTDVLAE YQVVLFLDTR PDTPTQREAF RKYMENGGAW MGFHFSAFAL
TPSDYPQNWD WYHNEFLGSG SYGSNTWRPT SAILRVEHPE HPAMKHLPAT FKSSPNEWYR
WSNDLKANKD IEILLSIDPA SFPLGTGPKP HEIWHSGYYP VVWTNRRYKM LYMNMGHNDI
DYENHTNRDL SHTFDNKLQS RFILDALFWL GGR