Gene Cpin_6772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6772 
Symbol 
ID8362964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8483809 
End bp8484315 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content47% 
IMG OID644968905 
Productputative OHCU decarboxylase 
Protein accessionYP_003126374 
Protein GI256425721 
COG category[S] Function unknown 
COG ID[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03180] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTGA CAGCACTTAA TGCACTACCA CCAGAACAAT TGAATGAAGC GCTCGGCAAA 
TGCTGTGGCG CTACCGCATG GATTCAGAAA ATGACCAATG AATTTCCTGT AAAAGATGAA
GACAGTCTGC TGACCGCCGC CGCCCGTAAC TGGCAATCCT GTACAGAAAG CGACTGGAAA
GAAGCCTTTG CCCATCACCC TAAGATCGGC GACCTCCATT CGCTGCAACA CAAATTTGCC
GCTACAGGAC AATGGGCTAC CGGAGAACAG GCGGGCGCCG TCGATGCTTC TACAGTGATA
CTACAGGCCC TTTCAAAAGG AAACAAGCTG TATGAAGATA AATTCGGCTA CATTTTCATC
GTATGTGCCA CAGGCAAATC TGCCCCTGAA ATGTTATCAA TTCTTACCGA ACGATTGAAA
AACGAGGAAG GAGAAGAGAT AAAGATTGCG ATGGGTGAAC AGGAAAAAAT CACCGCTATC
AGACTTAAAA AGCTGCTGAG CGCATGA
 
Protein sequence
MTLTALNALP PEQLNEALGK CCGATAWIQK MTNEFPVKDE DSLLTAAARN WQSCTESDWK 
EAFAHHPKIG DLHSLQHKFA ATGQWATGEQ AGAVDASTVI LQALSKGNKL YEDKFGYIFI
VCATGKSAPE MLSILTERLK NEEGEEIKIA MGEQEKITAI RLKKLLSA