Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6772 |
Symbol | |
ID | 8362964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8483809 |
End bp | 8484315 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968905 |
Product | putative OHCU decarboxylase |
Protein accession | YP_003126374 |
Protein GI | 256425721 |
COG category | [S] Function unknown |
COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03180] OHCU decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTGA CAGCACTTAA TGCACTACCA CCAGAACAAT TGAATGAAGC GCTCGGCAAA TGCTGTGGCG CTACCGCATG GATTCAGAAA ATGACCAATG AATTTCCTGT AAAAGATGAA GACAGTCTGC TGACCGCCGC CGCCCGTAAC TGGCAATCCT GTACAGAAAG CGACTGGAAA GAAGCCTTTG CCCATCACCC TAAGATCGGC GACCTCCATT CGCTGCAACA CAAATTTGCC GCTACAGGAC AATGGGCTAC CGGAGAACAG GCGGGCGCCG TCGATGCTTC TACAGTGATA CTACAGGCCC TTTCAAAAGG AAACAAGCTG TATGAAGATA AATTCGGCTA CATTTTCATC GTATGTGCCA CAGGCAAATC TGCCCCTGAA ATGTTATCAA TTCTTACCGA ACGATTGAAA AACGAGGAAG GAGAAGAGAT AAAGATTGCG ATGGGTGAAC AGGAAAAAAT CACCGCTATC AGACTTAAAA AGCTGCTGAG CGCATGA
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Protein sequence | MTLTALNALP PEQLNEALGK CCGATAWIQK MTNEFPVKDE DSLLTAAARN WQSCTESDWK EAFAHHPKIG DLHSLQHKFA ATGQWATGEQ AGAVDASTVI LQALSKGNKL YEDKFGYIFI VCATGKSAPE MLSILTERLK NEEGEEIKIA MGEQEKITAI RLKKLLSA
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