Gene Cpin_6743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6743 
Symbol 
ID8362935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8451239 
End bp8451709 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID644968876 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003126345 
Protein GI256425692 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.436877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATG ATGATTACGA CGATATGATC AAAAAAATAA AGAAACGTTC GGCTTGCCCG 
ATTAGCTTCA GCCTTGACTT TCTTGGCGAC AAATGGACGC TGCTGATCGT CCGGGACATC
CTGCTTAACA ATAAAAACAC CTTTGGCGAG TTTATTCAGT CGGCTGAGGG CATTGCGACC
AATGTCTTAA CAGATCGATT AAAAATGCTT GAAAGCGAAG GATTCATTAT GAAATATCCC
GTTCCCGGCA AGCCGAGGGT GGCATATTGT CTTACGGAAA GAGGGGTTGG GCTTATCCCG
ATCATCATGG AAATGGCCAT TTGGGGAGTG TCAGAGAATA ACACCGAGAT CAAAAAGGAG
CTAACAGCAG CACTCAAAAA AGATAAGACA GGCGTTTTAT CGGCATTATC GAATAAACAT
CTGGAGATAT ACGAGCAAAG GAAGGGGACT CGGATAAAAT CTGATCTCTG A
 
Protein sequence
MNDDDYDDMI KKIKKRSACP ISFSLDFLGD KWTLLIVRDI LLNNKNTFGE FIQSAEGIAT 
NVLTDRLKML ESEGFIMKYP VPGKPRVAYC LTERGVGLIP IIMEMAIWGV SENNTEIKKE
LTAALKKDKT GVLSALSNKH LEIYEQRKGT RIKSDL