Gene Cpin_6737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6737 
Symbol 
ID8362928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8441523 
End bp8442383 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content44% 
IMG OID644968869 
Productglycoside hydrolase family 16 
Protein accessionYP_003126339 
Protein GI256425686 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.833986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.682845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC TGAAATATCT CCCTTTTATT CTGTTGGGCA TCAATATACT TTCCTGCTCA 
GGAAAAGGAG ATGGTGGTGG AAGCTCACCT GATCCTGTTA CGCCACAAGG ACCTGTTGAT
AAAGGCTGGG CATTTGAAAC AACTCCCGTA TGGGCAGATG AATTTGATTA CACCGGATTG
CCGGATAATA CCAAATGGGG ATATGACCTC GGCGGTGGCG GATGGGGAAA CAATGAACTG
GAGTATTATA CTAATAGTCC TGATAACGCA TCTGTTGCAA ATGGTAAACT GACCATTACT
GCCAGAAAAG AAGCAAAAGA GAACCGTAAT TATACTTCTG CCCGCCTGGT GACCCGGGGA
AAGGGGGACT TCCTGTATGG CCGTTTTGAG ATTAAAGCAA AGTTGCCTGC CGGTAAAGGA
ACCTGGCCCG CCATCTGGAT GTTGCCTACG GATTGGGCAT ACGGCGACTG GCCTAAATCA
GGTGAGATCG ATATTATGGA ACATGTGGGA TATGATCCGG ATGTAGTTCA TATCACTACA
CATACAGAAG CCTATTATTT CAAAATAGGT ACACAGAAAA CAGCTACCAA GAAAATAGCG
AATGCAACCA CGGACTATCA CCTGTATCGC GTAGACTGGA CGCCTTATGC CATCAGTGGA
TATATCGACA ACCAGTTAAT CTTCAAGTTC GTAAATGAAG GGAAAGGATA TACCGTGTGG
CCTTTCGATA AAAAATTCCA CCTCTTACTT AACATTGCTG TAGGTGGTGA CTGGGGTGGC
GCACAAGGAA TGGATGATTC TATTTATCCC GTTACCATGG ATGTTGACTA TGTCCGTGTT
TATAAAATGA TTGAAAAATG A
 
Protein sequence
MKRLKYLPFI LLGINILSCS GKGDGGGSSP DPVTPQGPVD KGWAFETTPV WADEFDYTGL 
PDNTKWGYDL GGGGWGNNEL EYYTNSPDNA SVANGKLTIT ARKEAKENRN YTSARLVTRG
KGDFLYGRFE IKAKLPAGKG TWPAIWMLPT DWAYGDWPKS GEIDIMEHVG YDPDVVHITT
HTEAYYFKIG TQKTATKKIA NATTDYHLYR VDWTPYAISG YIDNQLIFKF VNEGKGYTVW
PFDKKFHLLL NIAVGGDWGG AQGMDDSIYP VTMDVDYVRV YKMIEK