| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6736 |
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| Symbol | |
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| ID | 8362927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8440069 |
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| End bp | 8441526 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968868 |
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| Product | glycoside hydrolase family 30 |
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| Protein accession | YP_003126338 |
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| Protein GI | 256425685 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.338177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTCC ACTATAAAAC CCGTATCAGC CTGACGGCTT TACTGCTGTC CGGGATGATC
GCTTTTGCCG GCTGTAAGGA TAATGGTACT GAAACCCCTG TCAGACCTGT TGATCCGACT
GTAGAAAAAG ATACTACTGA TGTGTTGATG TGGCTGACAA AAGGAGACAA ATCGGTACTC
CTGAAGCAAC AGAAAGTCAA CCTGCTTTTT AAGGATACGC TGAATGTATA TCCTACCATT
AAAGTGGATG CTTCTCAAAC ATACCAGTCG ATAGATGGCT TTGGTTACTG TCTGACAGAC
GGTAGCGCGA TGCTGATCAA TTCACTGCCG GCTGATGCAC AGGATGCATT GCTGAAAGAA
TTATTCCTGC CTGATACAGC GCATCTGGGT GTGAGCTACC TGCGCGTGAG CATTGGCGCC
TCCGATCTGA GCGTGGCGCC TTTTACCTAT AATGATCTGC CGACCGGACA AACGGACGTG
GACATGACTA AATTCAGCAT AGAGAAGGAA AGAAAAGACC TGTTGCCTAT TCTGAAGAAA
GTAGTGGCCC TGTCACCCAA TATTAAAATA CTGGGTTCTC CCTGGTCAGC TCCTTCCTGG
ATGAAGACAA ATAACGCTTC TAAAGGCGGT AGTCTGAAAC CGGAATACTA TGCTGCCTAC
GCCAGATATT TTGTGAAATA TATCCAGGCT ATGAAGGCGG AAGGCATCAC CATAGATGCC
ATCACTCCAC AGAACGAACC GCTGCATGGT GGTAATAATC CAAGCATGGT TATGCAGGCC
AATGAGCAGG CTGATTTTGT AAAGAATCAC CTGGGACCTG CTTTTAAAGC TGCCGGTCTG
ACTACTAAGA TCATCGTGTA CGATCATAAT GCAGATAAAC CGGAATACCC GGCTGCGATA
CTTGGTGACG CTGCTGCCTA TTCTTATGTG GATGGCTCGG CTTTCCATCT CTATGGTGGC
AGTATCACAG CGCTGACGCA GTTGCATGAC GCTTATCCGG AGAAGAACAT CTACTTCACT
GAACAGTGGG TAGGTGGTCC AGGTAATTTC GGTAACGACC TGCAATGGCA TGTGAGCACC
CTGATTGTAG GCGCTACCCG TAACTGGAGC CGTAATGTGC TGGAATGGAA CCTGGCTGCT
GACGCTAATT ATGGTCCGCA TACAGACGGT GGTTGTACTA CTTGCCTGGG CGCGTTGACA
ATTGGTTCAG GAGTAATTCG TAACGTTGCG TATTATATCA TCGGACATGC CTCTAAATTT
GTACGTCCGG GTGCTGTCAG GATTGCTTCC AATATCACCA GTCAGCTGGA TAACGTGGCA
TTCAAAACTC CTGATGGCAA GACGGCACTG ATCGTGGTAA ATAGTGGGTC TACTCCACAG
ACGTTCAATA TCCAGTCCAA CGGGAAAATT GTAACTACTT CCCTGACTAA CGGTGCAGTA
GCTACTTATA TCTGGTAA
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| Protein sequence | MIFHYKTRIS LTALLLSGMI AFAGCKDNGT ETPVRPVDPT VEKDTTDVLM WLTKGDKSVL
LKQQKVNLLF KDTLNVYPTI KVDASQTYQS IDGFGYCLTD GSAMLINSLP ADAQDALLKE
LFLPDTAHLG VSYLRVSIGA SDLSVAPFTY NDLPTGQTDV DMTKFSIEKE RKDLLPILKK
VVALSPNIKI LGSPWSAPSW MKTNNASKGG SLKPEYYAAY ARYFVKYIQA MKAEGITIDA
ITPQNEPLHG GNNPSMVMQA NEQADFVKNH LGPAFKAAGL TTKIIVYDHN ADKPEYPAAI
LGDAAAYSYV DGSAFHLYGG SITALTQLHD AYPEKNIYFT EQWVGGPGNF GNDLQWHVST
LIVGATRNWS RNVLEWNLAA DANYGPHTDG GCTTCLGALT IGSGVIRNVA YYIIGHASKF
VRPGAVRIAS NITSQLDNVA FKTPDGKTAL IVVNSGSTPQ TFNIQSNGKI VTTSLTNGAV
ATYIW
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