| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6735 |
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| Symbol | |
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| ID | 8362926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8438589 |
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| End bp | 8440046 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968867 |
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| Product | glycoside hydrolase family 30 |
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| Protein accession | YP_003126337 |
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| Protein GI | 256425684 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.39769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGT ATGCTTTGAT GGGCCTCTTA CTGGTAGCAT ATACCGGTTA TGCAAAAAGT
GAGGCCCTGA GTAACAGGAA GGATTCCACC GTACGCAAAG GTGTGACGGT GTATACAACC
GCCGAGAATA CCAAACTGCG TTTGTCAGCA ACAGCAACGC TGTCTTTTGC ACCCATGAAG
CAGCCGCTGG AAACAGAAGT CTGCATATTT GTAGATCCTG CTAAAAGTTT CCAGACACTG
ACTGGTATCG GTGGCGCGCT GACAGATGCT TCTGCGGAAG TATGGGCAAA ACTGCCAAAA
GAGAAACAAC AGGAACTGCT GAAGGCGTAT TACGATCCGG TAAATGGTAT CGGGTATACT
TTGGCGAGAA CTAATATTCA GAGCTGCGAC TTCTCCAGCG GTTCTTACAG CTATGTAAAG
GAGAATGACA GCCTGTTAAA AACATTCAGT ATTGAACATG ACCAGCAGTA CCGCATCCCT
TTTATTAAGG CGGTGATAGG CGCTGCCGGT GGAAAGATAC CATTGTATGT TAGCCCCTGG
AGCCCTCCGG CCTGGATGAA GGATAACAAC GACATGCTGC ATGGCGGTAA ACTGTTAGCG
AAGTATTACC AGTCATGGGC CAACTTCTAC GTGAAGTTTA TCAAAGCTTA TGAGGCACAG
GGTATTCCTG TATGGGGACT GACAGTGCAG AATGAACCAA TGGCTGTACA GAAATGGGAG
TCCTGTAATT ATACTGCGGA AGAGGAGAGA GATTTCATCA AACGTTATCT CGGACCTACC
TTACAGAAAC AGGGGATGGC TGCTAAGAAG CTGATCGCAT GGGATCACAA CCGCGACCAG
GTATATCAGC GCGCCAGCAC TATTCTGGAG GATCCTGCTG CTGCAAAGTA TGTATGGGGT
ATCGGTTACC ACTGGTATGA AACATGGACC GGCAGTGCTA TGATGTTTGA CAACGTACGC
CGTGTTGCAG AAACATTCCC GGGTAAGAAC CTTGTCTTTA CAGAAGGTTG TGTAGAGTCT
TTCAAATACA ACCGTATCAA TGAATGGTTC CTGGGAGAGC GTTATGGTCT TTCCCTGGTA
AATGATTTCA ATAATGGTAC TGTTGCCTGG ACAGACTGGA ACATCCTGCT GGATGAAAAT
GGTGGTCCTA ACCACGTAGG TAACTTCTGC TTTGCACCTG TACATGCAGA TACAAAGACC
GGAGAACTGA TCTACACAAA TGCTTATTAC TACCTGGGTC ATTTCTCCAA ATTCATCCGT
CCGGGTGCTA AGCGTGTGAT TGCTTCTTCT AACAGAACAG ATCTGCAAAC AACTGCATTT
ATCAACAAAG ATGGTAAACT GGCGGTAGTT GTACTGAACC TGTCTGATAA GGAGATTCCT
TACAAACTGT GGATAAAAGG GGAAGCAGCA GCTGCAAACA GTCTGCCGCA CTCTATTGCC
ACCCTGATCG TTGACTAA
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| Protein sequence | MRKYALMGLL LVAYTGYAKS EALSNRKDST VRKGVTVYTT AENTKLRLSA TATLSFAPMK
QPLETEVCIF VDPAKSFQTL TGIGGALTDA SAEVWAKLPK EKQQELLKAY YDPVNGIGYT
LARTNIQSCD FSSGSYSYVK ENDSLLKTFS IEHDQQYRIP FIKAVIGAAG GKIPLYVSPW
SPPAWMKDNN DMLHGGKLLA KYYQSWANFY VKFIKAYEAQ GIPVWGLTVQ NEPMAVQKWE
SCNYTAEEER DFIKRYLGPT LQKQGMAAKK LIAWDHNRDQ VYQRASTILE DPAAAKYVWG
IGYHWYETWT GSAMMFDNVR RVAETFPGKN LVFTEGCVES FKYNRINEWF LGERYGLSLV
NDFNNGTVAW TDWNILLDEN GGPNHVGNFC FAPVHADTKT GELIYTNAYY YLGHFSKFIR
PGAKRVIASS NRTDLQTTAF INKDGKLAVV VLNLSDKEIP YKLWIKGEAA AANSLPHSIA
TLIVD
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